Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02297

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02295 and MPMX26_02296 are separated by 48 nucleotidesMPMX26_02296 and MPMX26_02297 are separated by 15 nucleotidesMPMX26_02297 and MPMX26_02298 are separated by 857 nucleotides MPMX26_02295: MPMX26_02295 - putative HTH-type transcriptional regulator, at 2,364,747 to 2,365,775 _02295 MPMX26_02296: MPMX26_02296 - N-acetyldiaminopimelate deacetylase, at 2,365,824 to 2,366,477 _02296 MPMX26_02297: MPMX26_02297 - Hippurate hydrolase, at 2,366,493 to 2,367,197 _02297 MPMX26_02298: MPMX26_02298 - 5-formyltetrahydrofolate cyclo-ligase, at 2,368,055 to 2,368,636 _02298 Position (kb) 2366 2367 2368Strain fitness (log2 ratio) -1 0 1at 2366.226 kb on - strand, within MPMX26_02296at 2366.529 kb on + strandat 2366.949 kb on - strand, within MPMX26_02297at 2367.926 kb on + strandat 2368.006 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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2,366,226 - MPMX26_02296 0.61 -0.0
2,366,529 + -0.7
2,366,949 - MPMX26_02297 0.65 -0.9
2,367,926 + -0.0
2,368,006 + -0.2

Or see this region's nucleotide sequence