Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01598

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01597 and MPMX26_01598 are separated by 35 nucleotidesMPMX26_01598 and MPMX26_01599 are separated by 103 nucleotides MPMX26_01597: MPMX26_01597 - putative transporter, at 1,659,062 to 1,660,240 _01597 MPMX26_01598: MPMX26_01598 - HTH-type transcriptional regulator TsaQ1/TsaQ2, at 1,660,276 to 1,661,121 _01598 MPMX26_01599: MPMX26_01599 - Acetyl-CoA:oxalate CoA-transferase, at 1,661,225 to 1,662,442 _01599 Position (kb) 1660 1661 1662Strain fitness (log2 ratio) -1 0 1at 1660.276 kb on - strandat 1660.312 kb on - strandat 1660.317 kb on - strandat 1660.331 kb on - strandat 1660.427 kb on - strand, within MPMX26_01598at 1660.437 kb on - strand, within MPMX26_01598at 1660.444 kb on - strand, within MPMX26_01598at 1660.444 kb on - strand, within MPMX26_01598at 1660.516 kb on - strand, within MPMX26_01598at 1660.587 kb on - strand, within MPMX26_01598at 1660.605 kb on - strand, within MPMX26_01598at 1660.642 kb on - strand, within MPMX26_01598at 1660.642 kb on - strand, within MPMX26_01598at 1660.672 kb on - strand, within MPMX26_01598at 1660.672 kb on - strand, within MPMX26_01598at 1660.677 kb on - strand, within MPMX26_01598at 1660.682 kb on - strand, within MPMX26_01598at 1660.712 kb on - strand, within MPMX26_01598at 1660.728 kb on - strand, within MPMX26_01598at 1660.733 kb on - strand, within MPMX26_01598at 1660.741 kb on - strand, within MPMX26_01598at 1660.741 kb on - strand, within MPMX26_01598at 1660.765 kb on - strand, within MPMX26_01598at 1660.805 kb on - strand, within MPMX26_01598at 1660.829 kb on - strand, within MPMX26_01598at 1660.841 kb on - strand, within MPMX26_01598at 1660.878 kb on - strand, within MPMX26_01598at 1660.894 kb on - strand, within MPMX26_01598at 1660.894 kb on - strand, within MPMX26_01598at 1660.907 kb on - strand, within MPMX26_01598at 1660.957 kb on - strand, within MPMX26_01598at 1660.976 kb on - strand, within MPMX26_01598at 1660.976 kb on - strand, within MPMX26_01598at 1660.976 kb on - strand, within MPMX26_01598at 1660.976 kb on - strand, within MPMX26_01598at 1660.976 kb on - strand, within MPMX26_01598at 1660.976 kb on - strand, within MPMX26_01598at 1660.994 kb on - strand, within MPMX26_01598at 1660.994 kb on - strand, within MPMX26_01598at 1660.994 kb on - strand, within MPMX26_01598at 1660.994 kb on - strand, within MPMX26_01598at 1660.994 kb on - strand, within MPMX26_01598at 1660.994 kb on - strand, within MPMX26_01598at 1661.007 kb on - strand, within MPMX26_01598at 1661.007 kb on - strand, within MPMX26_01598at 1661.007 kb on - strand, within MPMX26_01598at 1661.007 kb on - strand, within MPMX26_01598at 1661.017 kb on - strand, within MPMX26_01598at 1661.041 kb on - strandat 1661.076 kb on - strandat 1661.119 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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1,660,276 - -0.4
1,660,312 - -0.3
1,660,317 - -0.8
1,660,331 - -0.5
1,660,427 - MPMX26_01598 0.18 -0.8
1,660,437 - MPMX26_01598 0.19 -0.5
1,660,444 - MPMX26_01598 0.20 +0.1
1,660,444 - MPMX26_01598 0.20 -0.6
1,660,516 - MPMX26_01598 0.28 +0.2
1,660,587 - MPMX26_01598 0.37 -0.2
1,660,605 - MPMX26_01598 0.39 +0.2
1,660,642 - MPMX26_01598 0.43 -0.0
1,660,642 - MPMX26_01598 0.43 +0.2
1,660,672 - MPMX26_01598 0.47 -0.4
1,660,672 - MPMX26_01598 0.47 +0.1
1,660,677 - MPMX26_01598 0.47 +0.1
1,660,682 - MPMX26_01598 0.48 -0.1
1,660,712 - MPMX26_01598 0.52 -0.3
1,660,728 - MPMX26_01598 0.53 -0.6
1,660,733 - MPMX26_01598 0.54 +0.8
1,660,741 - MPMX26_01598 0.55 -0.6
1,660,741 - MPMX26_01598 0.55 -0.7
1,660,765 - MPMX26_01598 0.58 -0.3
1,660,805 - MPMX26_01598 0.63 -0.3
1,660,829 - MPMX26_01598 0.65 -0.1
1,660,841 - MPMX26_01598 0.67 -0.7
1,660,878 - MPMX26_01598 0.71 -0.4
1,660,894 - MPMX26_01598 0.73 -0.5
1,660,894 - MPMX26_01598 0.73 -0.5
1,660,907 - MPMX26_01598 0.75 -0.1
1,660,957 - MPMX26_01598 0.80 -0.3
1,660,976 - MPMX26_01598 0.83 -0.7
1,660,976 - MPMX26_01598 0.83 -0.2
1,660,976 - MPMX26_01598 0.83 -0.3
1,660,976 - MPMX26_01598 0.83 +0.5
1,660,976 - MPMX26_01598 0.83 -0.6
1,660,976 - MPMX26_01598 0.83 -0.2
1,660,994 - MPMX26_01598 0.85 -0.1
1,660,994 - MPMX26_01598 0.85 +0.2
1,660,994 - MPMX26_01598 0.85 -0.1
1,660,994 - MPMX26_01598 0.85 -0.5
1,660,994 - MPMX26_01598 0.85 +0.2
1,660,994 - MPMX26_01598 0.85 -0.1
1,661,007 - MPMX26_01598 0.86 -0.3
1,661,007 - MPMX26_01598 0.86 +0.0
1,661,007 - MPMX26_01598 0.86 -0.5
1,661,007 - MPMX26_01598 0.86 -0.3
1,661,017 - MPMX26_01598 0.88 -0.4
1,661,041 - -1.5
1,661,076 - +0.0
1,661,119 - +0.1

Or see this region's nucleotide sequence