Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00176

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00174 and MPMX26_00175 are separated by 5 nucleotidesMPMX26_00175 and MPMX26_00176 are separated by 68 nucleotidesMPMX26_00176 and MPMX26_00177 are separated by 67 nucleotidesMPMX26_00177 and MPMX26_00178 are separated by 211 nucleotides MPMX26_00174: MPMX26_00174 - putative peptidoglycan glycosyltransferase FtsW, at 188,573 to 189,769 _00174 MPMX26_00175: MPMX26_00175 - hypothetical protein, at 189,775 to 190,005 _00175 MPMX26_00176: MPMX26_00176 - Glutamyl-Q tRNA(Asp) synthetase, at 190,074 to 190,928 _00176 MPMX26_00177: MPMX26_00177 - RNA polymerase-binding transcription factor DksA, at 190,996 to 191,529 _00177 MPMX26_00178: MPMX26_00178 - 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, at 191,741 to 192,550 _00178 Position (kb) 190 191Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 189.723 kb on + strandat 189.723 kb on + strandat 189.723 kb on + strandat 189.726 kb on + strandat 189.736 kb on + strandat 189.798 kb on - strand, within MPMX26_00175at 189.853 kb on - strand, within MPMX26_00175at 189.853 kb on - strand, within MPMX26_00175at 189.870 kb on - strand, within MPMX26_00175at 189.870 kb on - strand, within MPMX26_00175at 189.906 kb on + strand, within MPMX26_00175at 190.033 kb on - strandat 190.033 kb on - strandat 190.033 kb on - strandat 190.033 kb on - strandat 190.110 kb on - strandat 190.121 kb on - strandat 190.121 kb on - strandat 190.128 kb on - strandat 190.133 kb on - strandat 190.273 kb on - strand, within MPMX26_00176at 190.279 kb on - strand, within MPMX26_00176at 190.309 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.311 kb on - strand, within MPMX26_00176at 190.316 kb on - strand, within MPMX26_00176at 190.316 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.321 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.326 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.331 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.336 kb on - strand, within MPMX26_00176at 190.378 kb on - strand, within MPMX26_00176at 190.399 kb on - strand, within MPMX26_00176at 190.407 kb on - strand, within MPMX26_00176at 190.426 kb on - strand, within MPMX26_00176at 190.428 kb on - strand, within MPMX26_00176at 190.428 kb on - strand, within MPMX26_00176at 190.447 kb on - strand, within MPMX26_00176at 190.459 kb on - strand, within MPMX26_00176at 190.498 kb on - strand, within MPMX26_00176at 190.535 kb on - strand, within MPMX26_00176at 190.535 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.555 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.611 kb on - strand, within MPMX26_00176at 190.616 kb on - strand, within MPMX26_00176at 190.655 kb on - strand, within MPMX26_00176at 190.656 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.757 kb on - strand, within MPMX26_00176at 190.767 kb on - strand, within MPMX26_00176at 190.767 kb on - strand, within MPMX26_00176at 190.773 kb on - strand, within MPMX26_00176at 190.773 kb on - strand, within MPMX26_00176at 190.774 kb on - strand, within MPMX26_00176at 190.783 kb on - strand, within MPMX26_00176at 190.783 kb on - strand, within MPMX26_00176at 190.783 kb on - strand, within MPMX26_00176at 190.834 kb on - strand, within MPMX26_00176at 190.836 kb on - strand, within MPMX26_00176at 190.846 kb on - strandat 190.876 kb on - strandat 190.881 kb on - strandat 190.911 kb on - strandat 190.920 kb on - strandat 190.920 kb on - strandat 190.921 kb on - strandat 190.935 kb on - strandat 190.971 kb on - strandat 191.053 kb on - strand, within MPMX26_00177at 191.053 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.078 kb on - strand, within MPMX26_00177at 191.088 kb on - strand, within MPMX26_00177at 191.094 kb on - strand, within MPMX26_00177at 191.125 kb on - strand, within MPMX26_00177at 191.130 kb on - strand, within MPMX26_00177at 191.157 kb on - strand, within MPMX26_00177at 191.177 kb on - strand, within MPMX26_00177at 191.255 kb on - strand, within MPMX26_00177at 191.255 kb on - strand, within MPMX26_00177at 191.260 kb on - strand, within MPMX26_00177at 191.260 kb on - strand, within MPMX26_00177at 191.280 kb on - strand, within MPMX26_00177at 191.292 kb on - strand, within MPMX26_00177at 191.307 kb on - strand, within MPMX26_00177at 191.354 kb on - strand, within MPMX26_00177at 191.362 kb on - strand, within MPMX26_00177at 191.396 kb on - strand, within MPMX26_00177at 191.396 kb on - strand, within MPMX26_00177at 191.401 kb on - strand, within MPMX26_00177at 191.417 kb on - strand, within MPMX26_00177at 191.419 kb on - strand, within MPMX26_00177at 191.419 kb on - strand, within MPMX26_00177at 191.422 kb on - strand, within MPMX26_00177at 191.505 kb on - strandat 191.536 kb on - strandat 191.541 kb on - strandat 191.553 kb on - strandat 191.610 kb on - strandat 191.672 kb on - strandat 191.680 kb on - strandat 191.680 kb on - strandat 191.680 kb on - strandat 191.680 kb on - strandat 191.680 kb on - strandat 191.694 kb on - strandat 191.797 kb on - strandat 191.820 kb on - strandat 191.825 kb on - strand, within MPMX26_00178at 191.851 kb on - strand, within MPMX26_00178at 191.852 kb on - strand, within MPMX26_00178at 191.852 kb on - strand, within MPMX26_00178at 191.862 kb on + strand, within MPMX26_00178at 191.883 kb on + strand, within MPMX26_00178at 191.891 kb on - strand, within MPMX26_00178at 191.891 kb on - strand, within MPMX26_00178at 191.891 kb on - strand, within MPMX26_00178at 191.896 kb on - strand, within MPMX26_00178at 191.901 kb on - strand, within MPMX26_00178at 191.901 kb on - strand, within MPMX26_00178at 191.901 kb on - strand, within MPMX26_00178at 191.906 kb on - strand, within MPMX26_00178at 191.909 kb on - strand, within MPMX26_00178

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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189,723 + -0.7
189,723 + -1.3
189,723 + -0.5
189,726 + +0.4
189,736 + +0.1
189,798 - MPMX26_00175 0.10 -1.3
189,853 - MPMX26_00175 0.34 +1.6
189,853 - MPMX26_00175 0.34 +0.1
189,870 - MPMX26_00175 0.41 +0.5
189,870 - MPMX26_00175 0.41 -0.1
189,906 + MPMX26_00175 0.57 +1.2
190,033 - -0.4
190,033 - +0.5
190,033 - -0.9
190,033 - -0.1
190,110 - -0.2
190,121 - +0.6
190,121 - +0.3
190,128 - +0.2
190,133 - +0.7
190,273 - MPMX26_00176 0.23 -0.3
190,279 - MPMX26_00176 0.24 -0.3
190,309 - MPMX26_00176 0.27 -1.1
190,311 - MPMX26_00176 0.28 +0.0
190,311 - MPMX26_00176 0.28 +0.3
190,311 - MPMX26_00176 0.28 +0.1
190,311 - MPMX26_00176 0.28 +0.3
190,316 - MPMX26_00176 0.28 +0.4
190,316 - MPMX26_00176 0.28 -0.1
190,321 - MPMX26_00176 0.29 +0.5
190,321 - MPMX26_00176 0.29 -0.4
190,321 - MPMX26_00176 0.29 -0.2
190,321 - MPMX26_00176 0.29 +0.1
190,321 - MPMX26_00176 0.29 -0.4
190,321 - MPMX26_00176 0.29 +0.7
190,321 - MPMX26_00176 0.29 +0.1
190,321 - MPMX26_00176 0.29 +0.1
190,321 - MPMX26_00176 0.29 +0.4
190,326 - MPMX26_00176 0.29 +0.2
190,326 - MPMX26_00176 0.29 +0.1
190,326 - MPMX26_00176 0.29 -0.1
190,326 - MPMX26_00176 0.29 -0.0
190,326 - MPMX26_00176 0.29 +0.2
190,326 - MPMX26_00176 0.29 +0.3
190,331 - MPMX26_00176 0.30 +0.3
190,331 - MPMX26_00176 0.30 -0.1
190,331 - MPMX26_00176 0.30 +1.6
190,331 - MPMX26_00176 0.30 -0.1
190,331 - MPMX26_00176 0.30 +0.1
190,331 - MPMX26_00176 0.30 +0.4
190,331 - MPMX26_00176 0.30 +0.4
190,331 - MPMX26_00176 0.30 +0.1
190,331 - MPMX26_00176 0.30 +0.2
190,331 - MPMX26_00176 0.30 -0.0
190,331 - MPMX26_00176 0.30 -0.2
190,336 - MPMX26_00176 0.31 +0.4
190,336 - MPMX26_00176 0.31 +0.1
190,336 - MPMX26_00176 0.31 +0.7
190,336 - MPMX26_00176 0.31 +0.0
190,336 - MPMX26_00176 0.31 +0.4
190,336 - MPMX26_00176 0.31 +0.7
190,336 - MPMX26_00176 0.31 +0.1
190,336 - MPMX26_00176 0.31 +0.7
190,378 - MPMX26_00176 0.36 -0.1
190,399 - MPMX26_00176 0.38 +0.4
190,407 - MPMX26_00176 0.39 +0.2
190,426 - MPMX26_00176 0.41 -0.1
190,428 - MPMX26_00176 0.41 +0.1
190,428 - MPMX26_00176 0.41 -0.0
190,447 - MPMX26_00176 0.44 -0.1
190,459 - MPMX26_00176 0.45 +0.2
190,498 - MPMX26_00176 0.50 -1.6
190,535 - MPMX26_00176 0.54 +0.2
190,535 - MPMX26_00176 0.54 +0.8
190,555 - MPMX26_00176 0.56 +0.8
190,555 - MPMX26_00176 0.56 +2.7
190,555 - MPMX26_00176 0.56 +0.9
190,555 - MPMX26_00176 0.56 -0.5
190,555 - MPMX26_00176 0.56 +0.4
190,611 - MPMX26_00176 0.63 -0.6
190,611 - MPMX26_00176 0.63 -0.4
190,611 - MPMX26_00176 0.63 -0.4
190,611 - MPMX26_00176 0.63 +0.5
190,611 - MPMX26_00176 0.63 +1.2
190,616 - MPMX26_00176 0.63 -0.2
190,655 - MPMX26_00176 0.68 +0.2
190,656 - MPMX26_00176 0.68 +0.0
190,757 - MPMX26_00176 0.80 -0.1
190,757 - MPMX26_00176 0.80 +0.2
190,757 - MPMX26_00176 0.80 +0.0
190,757 - MPMX26_00176 0.80 +0.1
190,757 - MPMX26_00176 0.80 -0.1
190,767 - MPMX26_00176 0.81 -0.5
190,767 - MPMX26_00176 0.81 -0.1
190,773 - MPMX26_00176 0.82 +0.4
190,773 - MPMX26_00176 0.82 +0.4
190,774 - MPMX26_00176 0.82 +0.0
190,783 - MPMX26_00176 0.83 +0.4
190,783 - MPMX26_00176 0.83 -0.0
190,783 - MPMX26_00176 0.83 -0.0
190,834 - MPMX26_00176 0.89 +0.5
190,836 - MPMX26_00176 0.89 +0.2
190,846 - -0.3
190,876 - +0.1
190,881 - +0.1
190,911 - +0.6
190,920 - -0.0
190,920 - +0.3
190,921 - -0.4
190,935 - +0.8
190,971 - -0.0
191,053 - MPMX26_00177 0.11 -2.1
191,053 - MPMX26_00177 0.11 -1.4
191,078 - MPMX26_00177 0.15 -1.4
191,078 - MPMX26_00177 0.15 -1.3
191,078 - MPMX26_00177 0.15 -1.7
191,078 - MPMX26_00177 0.15 -3.3
191,078 - MPMX26_00177 0.15 -3.3
191,078 - MPMX26_00177 0.15 -3.0
191,088 - MPMX26_00177 0.17 -1.6
191,094 - MPMX26_00177 0.18 -1.3
191,125 - MPMX26_00177 0.24 -0.9
191,130 - MPMX26_00177 0.25 -0.9
191,157 - MPMX26_00177 0.30 -2.5
191,177 - MPMX26_00177 0.34 -2.6
191,255 - MPMX26_00177 0.49 -1.1
191,255 - MPMX26_00177 0.49 -2.3
191,260 - MPMX26_00177 0.49 -1.1
191,260 - MPMX26_00177 0.49 -1.7
191,280 - MPMX26_00177 0.53 -2.4
191,292 - MPMX26_00177 0.55 -3.1
191,307 - MPMX26_00177 0.58 -3.6
191,354 - MPMX26_00177 0.67 -2.5
191,362 - MPMX26_00177 0.69 -1.1
191,396 - MPMX26_00177 0.75 -0.7
191,396 - MPMX26_00177 0.75 -2.5
191,401 - MPMX26_00177 0.76 -3.9
191,417 - MPMX26_00177 0.79 -2.5
191,419 - MPMX26_00177 0.79 -3.3
191,419 - MPMX26_00177 0.79 -2.2
191,422 - MPMX26_00177 0.80 -2.8
191,505 - -1.8
191,536 - -3.7
191,541 - -1.1
191,553 - -3.3
191,610 - -1.9
191,672 - -0.9
191,680 - -0.4
191,680 - +0.0
191,680 - +0.9
191,680 - -0.4
191,680 - +0.3
191,694 - +1.2
191,797 - -0.2
191,820 - -0.1
191,825 - MPMX26_00178 0.10 -0.5
191,851 - MPMX26_00178 0.14 -1.2
191,852 - MPMX26_00178 0.14 -0.9
191,852 - MPMX26_00178 0.14 +0.8
191,862 + MPMX26_00178 0.15 -0.7
191,883 + MPMX26_00178 0.18 -0.3
191,891 - MPMX26_00178 0.19 -0.1
191,891 - MPMX26_00178 0.19 +0.6
191,891 - MPMX26_00178 0.19 +0.4
191,896 - MPMX26_00178 0.19 -0.1
191,901 - MPMX26_00178 0.20 -0.3
191,901 - MPMX26_00178 0.20 +0.2
191,901 - MPMX26_00178 0.20 -0.4
191,906 - MPMX26_00178 0.20 +0.3
191,909 - MPMX26_00178 0.21 -0.5

Or see this region's nucleotide sequence