Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF758

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
447,961	+		GFF757	0.30	-0.5
447,962	-		GFF757	0.30	-0.4
447,962	-		GFF757	0.30	+0.7
448,028	-		GFF757	0.36	-0.9
448,048	+		GFF757	0.37	+0.3
448,048	+		GFF757	0.37	-0.0
448,049	-		GFF757	0.38	+1.8
448,049	-		GFF757	0.38	-0.2
448,049	-		GFF757	0.38	+0.3
448,306	+		GFF757	0.60	-1.1
448,306	+		GFF757	0.60	-2.0
448,307	-		GFF757	0.60	+0.7
448,511	-		GFF757	0.78	-0.1
448,511	-		GFF757	0.78	+0.7
448,574	-		GFF757	0.83	-0.1
448,627	+		GFF757	0.88	+0.5
448,682	-				-0.1
448,709	-				+0.7
448,709	-				+0.3
448,806	+				-0.5
448,806	+				+0.1
448,806	+				-0.4
448,807	-				+0.4
449,049	-		GFF758	0.12	-0.8
449,357	+		GFF758	0.31	-0.2
449,357	+		GFF758	0.31	-0.5
449,358	-		GFF758	0.31	-0.9
449,358	-		GFF758	0.31	+0.0
449,360	+		GFF758	0.31	+0.3
449,360	+		GFF758	0.31	+0.3
449,360	+		GFF758	0.31	+0.1
449,361	-		GFF758	0.31	+0.2
449,361	-		GFF758	0.31	+0.7
449,361	-		GFF758	0.31	-0.4
449,375	+		GFF758	0.32	-0.2
449,375	+		GFF758	0.32	-0.1
449,376	-		GFF758	0.32	-0.0
449,376	-		GFF758	0.32	-0.4
449,376	-		GFF758	0.32	-0.8
449,952	-		GFF758	0.67	-2.3
449,952	-		GFF758	0.67	+0.2
449,952	-		GFF758	0.67	-0.2
450,065	+		GFF758	0.74	-0.4
450,520	+				-0.7
450,521	-				-0.5
450,521	-				+0.0
450,522	+				+0.5