Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4986

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
2,002,030	+		GFF4985	0.29	+0.1
2,002,483	+		GFF4985	0.60	+1.6
2,002,483	+		GFF4985	0.60	-0.5
2,002,483	+		GFF4985	0.60	-0.0
2,002,484	-		GFF4985	0.60	-0.1
2,002,958	-				+0.3
2,003,811	+		GFF4986	0.64	-1.2
2,003,812	-		GFF4986	0.64	-0.8
2,003,880	+		GFF4986	0.69	-0.9
2,003,880	+		GFF4986	0.69	-0.4
2,003,881	-		GFF4986	0.69	+0.2
2,003,956	-		GFF4986	0.75	+1.0
2,003,956	-		GFF4986	0.75	-0.1
2,004,238	-				+0.1
2,004,497	-		GFF4987	0.18	+0.8
2,004,535	+		GFF4987	0.22	+0.5
2,004,536	-		GFF4987	0.22	-0.0
2,004,865	+		GFF4987	0.53	+1.0
2,004,865	+		GFF4987	0.53	+0.5
2,004,974	-		GFF4987	0.63	-0.2
2,004,974	-		GFF4987	0.63	+0.4