Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4922

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
1,936,929	+		GFF4921	0.58	-0.2
1,936,953	+		GFF4921	0.60	-0.9
1,936,996	+		GFF4921	0.62	+0.8
1,937,025	+		GFF4921	0.63	+1.1
1,937,025	+		GFF4921	0.63	-0.2
1,937,026	-		GFF4921	0.63	-0.4
1,937,026	-		GFF4921	0.63	-0.6
1,937,026	-		GFF4921	0.63	+0.3
1,937,061	+		GFF4921	0.64	-1.1
1,937,202	+		GFF4921	0.71	-0.9
1,937,203	-		GFF4921	0.71	+0.7
1,937,203	-		GFF4921	0.71	-0.7
1,937,203	-		GFF4921	0.71	-3.2
1,937,203	-		GFF4921	0.71	-0.5
1,937,203	-		GFF4921	0.71	+0.4
1,937,224	-		GFF4921	0.72	-1.1
1,937,259	+		GFF4921	0.74	-0.9
1,937,332	-		GFF4921	0.77	-0.4
1,937,332	-		GFF4921	0.77	+0.2
1,937,490	+		GFF4921	0.84	-1.3
1,937,491	-		GFF4921	0.84	-0.3
1,937,491	-		GFF4921	0.84	-0.5
1,937,574	+		GFF4921	0.88	-1.7
1,937,574	+		GFF4921	0.88	-0.6
1,937,574	+		GFF4921	0.88	-0.0
1,937,574	+		GFF4921	0.88	+0.8
1,937,575	-		GFF4921	0.88	-0.2
1,937,575	-		GFF4921	0.88	-0.7
1,937,856	+		GFF4922	0.19	-1.4
1,937,856	+		GFF4922	0.19	-2.8
1,937,856	+		GFF4922	0.19	+0.2
1,937,856	+		GFF4922	0.19	-0.7
1,937,856	+		GFF4922	0.19	-0.2
1,937,856	+		GFF4922	0.19	-0.0
1,937,856	+		GFF4922	0.19	-0.9
1,937,856	+		GFF4922	0.19	-0.8
1,937,856	+		GFF4922	0.19	-1.7
1,937,857	-		GFF4922	0.19	-1.0
1,937,857	-		GFF4922	0.19	-0.4
1,937,857	-		GFF4922	0.19	-1.8
1,937,857	-		GFF4922	0.19	-0.3
1,937,857	-		GFF4922	0.19	-2.0
1,937,928	+		GFF4922	0.58	-1.4
1,937,928	+		GFF4922	0.58	+0.1
1,938,392	+		GFF4923	0.10	+0.0
1,938,393	-		GFF4923	0.10	-0.0
1,938,594	-		GFF4923	0.25	-0.1
1,938,653	-		GFF4923	0.29	-0.1
1,938,879	-		GFF4923	0.45	+0.7
1,938,884	+		GFF4923	0.46	-0.2
1,938,885	-		GFF4923	0.46	+0.4
1,938,885	-		GFF4923	0.46	-1.4
1,938,890	+		GFF4923	0.46	-0.2
1,938,890	+		GFF4923	0.46	-1.2
1,938,890	+		GFF4923	0.46	+0.2
1,938,890	+		GFF4923	0.46	-0.2
1,938,891	-		GFF4923	0.46	+1.2
1,938,891	-		GFF4923	0.46	+0.1
1,938,914	+		GFF4923	0.48	+0.2
1,938,915	-		GFF4923	0.48	+0.3
1,938,915	-		GFF4923	0.48	+0.6
1,938,998	+		GFF4923	0.54	+0.4
1,938,998	+		GFF4923	0.54	+0.3
1,938,999	-		GFF4923	0.54	-0.1
1,938,999	-		GFF4923	0.54	-0.4
1,938,999	-		GFF4923	0.54	+0.4