Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4742

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
1,710,434	-		GFF4741	0.13	+0.2
1,710,434	-		GFF4741	0.13	-0.8
1,710,568	+		GFF4741	0.28	+0.0
1,710,569	-		GFF4741	0.28	-0.4
1,710,746	-		GFF4741	0.48	+0.8
1,710,757	+		GFF4741	0.49	+0.2
1,710,757	+		GFF4741	0.49	-0.9
1,710,757	+		GFF4741	0.49	-1.4
1,710,757	+		GFF4741	0.49	+0.2
1,710,757	+		GFF4741	0.49	+0.9
1,710,757	+		GFF4741	0.49	-0.1
1,710,757	+		GFF4741	0.49	+1.2
1,710,757	+		GFF4741	0.49	+0.0
1,710,758	-		GFF4741	0.49	+1.0
1,710,758	-		GFF4741	0.49	+0.1
1,710,758	-		GFF4741	0.49	+0.0
1,710,758	-		GFF4741	0.49	+1.1
1,710,758	-		GFF4741	0.49	-0.0
1,710,760	+		GFF4741	0.50	+1.2
1,710,761	-		GFF4741	0.50	-0.1
1,710,829	+		GFF4741	0.57	-0.2
1,711,743	+		GFF4742	0.73	+0.0
1,711,744	-		GFF4742	0.73	+0.5
1,711,744	-		GFF4742	0.73	+1.0
1,711,744	-		GFF4742	0.73	+1.2
1,711,821	+		GFF4742	0.84	-0.5
1,711,821	+		GFF4742	0.84	-0.2
1,711,822	-		GFF4742	0.84	+0.0
1,711,890	+				-0.1
1,711,890	+				+0.2
1,711,890	+				-0.0
1,711,891	-				-0.1
1,712,007	+				+0.1
1,712,007	+				+0.7
1,712,008	-				+0.6
1,712,008	-				-0.4
1,712,300	+		GFF4743	0.11	+0.2
1,712,300	+		GFF4743	0.11	+0.0
1,712,300	+		GFF4743	0.11	+0.4
1,712,300	+		GFF4743	0.11	+0.1
1,712,300	+		GFF4743	0.11	+0.3
1,712,301	-		GFF4743	0.11	-0.7
1,712,375	+		GFF4743	0.13	-0.0
1,712,375	+		GFF4743	0.13	-0.6
1,712,735	-		GFF4743	0.24	-0.5