Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4625

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
1,572,372	-				+0.4
1,572,585	+				-1.3
1,572,585	+				+0.1
1,572,586	-				+0.3
1,572,586	-				-0.2
1,572,586	-				-0.5
1,572,587	+				+0.3
1,572,713	+				+0.1
1,572,713	+				-0.1
1,572,737	-				+0.1
1,572,779	+				-0.3
1,572,907	+				+1.2
1,572,908	-				+0.2
1,573,089	+				+0.2
1,573,090	-				+0.3
1,573,090	-				-0.5
1,573,146	-				+0.4
1,573,210	+				-0.2
1,573,211	-				-0.4
1,573,228	+				-0.0
1,573,229	-				+0.2
1,573,240	+				-0.5
1,573,240	+				+0.8
1,573,240	+				-0.2
1,573,240	+				-0.3
1,573,241	-				-0.2
1,573,241	-				-2.2
1,573,305	+				-0.1
1,573,305	+				-0.9
1,573,305	+				-0.2
1,573,306	-				-1.1
1,573,306	-				-0.2
1,573,306	-				-0.2
1,573,306	-				-0.9
1,573,640	+		GFF4625	0.21	-0.6
1,573,640	+		GFF4625	0.21	+0.8
1,573,649	+		GFF4625	0.22	-0.2
1,573,685	+		GFF4625	0.25	-0.4
1,573,685	+		GFF4625	0.25	+0.9
1,573,685	+		GFF4625	0.25	-0.9
1,573,686	-		GFF4625	0.25	+1.2
1,573,686	-		GFF4625	0.25	+0.0
1,573,686	-		GFF4625	0.25	-0.0
1,573,686	-		GFF4625	0.25	+0.3
1,573,686	-		GFF4625	0.25	-0.1
1,573,762	-		GFF4625	0.30	-2.0
1,573,771	+		GFF4625	0.31	-0.2
1,573,771	+		GFF4625	0.31	-1.2
1,574,213	+		GFF4625	0.64	+0.0
1,574,214	-		GFF4625	0.65	-0.3
1,574,214	-		GFF4625	0.65	-1.4
1,574,214	-		GFF4625	0.65	-0.7
1,574,297	+		GFF4625	0.71	-0.3
1,574,650	-				+0.1
1,574,680	-				-1.2
1,574,755	+				+0.4
1,574,845	+				+0.2
1,574,845	+				-0.1
1,574,891	+				+0.1
1,574,891	+				-0.7
1,574,892	-				+0.3
1,574,892	-				-0.1
1,574,892	-				-0.4
1,574,892	-				+0.1
1,574,892	-				-0.6
1,575,003	-				+0.2
1,575,036	+				-0.2
1,575,065	-				-1.0
1,575,065	-				+0.1
1,575,065	-				-0.7
1,575,098	-				+0.6
1,575,162	+				-1.4
1,575,163	-				-0.2
1,575,163	-				+0.3
1,575,163	-				+0.2
1,575,163	-				-0.7
1,575,284	+				-0.3
1,575,285	-				+0.2
1,575,349	-				+0.1
1,575,382	-				+0.7
1,575,495	+				-0.7
1,575,504	+				-0.4
1,575,513	+				+0.1
1,575,513	+				-0.1
1,575,514	-				-0.7
1,575,514	-				+1.3
1,575,661	-				-0.4
1,575,674	-				-0.2