Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4579

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
1,520,435	+				-0.5
1,520,435	+				-0.2
1,520,435	+				-0.1
1,520,435	+				+0.5
1,520,435	+				-0.3
1,520,435	+				-0.1
1,520,436	-				+0.3
1,520,436	-				+0.5
1,520,436	-				-0.6
1,520,436	-				+0.5
1,520,453	+				+0.1
1,520,453	+				+0.6
1,520,454	-				+0.4
1,521,003	-		GFF4578	0.65	+0.2
1,521,003	-		GFF4578	0.65	+1.7
1,521,065	+		GFF4578	0.72	-0.9
1,521,065	+		GFF4578	0.72	-0.2
1,521,065	+		GFF4578	0.72	-0.2
1,521,065	+		GFF4578	0.72	-0.2
1,521,066	-		GFF4578	0.72	-0.1
1,521,591	+		GFF4579	0.64	-1.0
1,521,592	+		GFF4579	0.64	-0.9
1,521,592	+		GFF4579	0.64	-0.5
1,521,592	+		GFF4579	0.64	-0.7
1,521,592	+		GFF4579	0.64	-0.7
1,521,593	-		GFF4579	0.64	-0.2
1,521,756	+				+0.2
1,521,757	-				-0.3
1,521,757	-				+0.1
1,521,757	-				-0.8
1,521,856	-				+0.3
1,522,248	+		GFF4580	0.34	+0.2
1,522,248	+		GFF4580	0.34	-0.6
1,522,248	+		GFF4580	0.34	-0.0
1,522,248	+		GFF4580	0.34	-1.1
1,522,249	-		GFF4580	0.34	-1.5
1,522,249	-		GFF4580	0.34	-0.1
1,522,249	-		GFF4580	0.34	+0.1
1,522,249	-		GFF4580	0.34	-0.1
1,522,249	-		GFF4580	0.34	-0.1
1,522,249	-		GFF4580	0.34	+0.3
1,522,329	+		GFF4580	0.39	+0.4
1,522,354	-		GFF4580	0.41	-0.4
1,522,354	-		GFF4580	0.41	-0.2
1,522,359	+		GFF4580	0.41	-0.2
1,522,360	-		GFF4580	0.41	-1.3
1,522,431	+		GFF4580	0.46	-0.6
1,522,431	+		GFF4580	0.46	-0.0
1,522,432	-		GFF4580	0.46	-0.1
1,522,558	-		GFF4580	0.55	-0.7
1,522,590	+		GFF4580	0.57	-0.2
1,522,590	+		GFF4580	0.57	+0.1