Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF412

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
79,602	-				+0.2
79,602	-				-0.0
79,615	+				+0.2
79,616	-				+1.2
79,675	+				+0.3
79,676	-				-1.1
79,676	-				+0.5
79,690	+				+0.0
79,691	-				+0.5
79,981	-		GFF411	0.34	+0.7
80,011	-		GFF411	0.38	-0.5
80,109	+		GFF411	0.52	-0.5
80,109	+		GFF411	0.52	+0.2
80,109	+		GFF411	0.52	-0.5
80,109	+		GFF411	0.52	-0.1
80,110	-		GFF411	0.52	-0.7
80,110	-		GFF411	0.52	+0.8
80,110	-		GFF411	0.52	-0.5
80,110	-		GFF411	0.52	-0.6
80,301	+		GFF411	0.79	-0.5
80,301	+		GFF411	0.79	-0.4
80,301	+		GFF411	0.79	-0.9
80,301	+		GFF411	0.79	-0.4
80,301	+		GFF411	0.79	-0.9
80,524	+				+0.2
80,743	+		GFF412	0.14	-0.9
80,743	+		GFF412	0.14	-0.2
80,743	+		GFF412	0.14	-0.9
80,743	+		GFF412	0.14	-0.3
80,752	+		GFF412	0.15	-0.3
80,752	+		GFF412	0.15	-0.2
80,836	+		GFF412	0.19	-0.4
80,876	-		GFF412	0.21	+0.0
80,876	-		GFF412	0.21	-0.4
80,876	-		GFF412	0.21	-0.5
80,917	+		GFF412	0.24	-0.1
80,918	-		GFF412	0.24	-1.3
80,918	-		GFF412	0.24	-1.6
80,944	+		GFF412	0.25	+0.0
80,945	-		GFF412	0.25	+1.5
81,062	-		GFF412	0.32	-1.6
81,062	-		GFF412	0.32	-1.5
81,244	+		GFF412	0.42	-0.7
81,245	-		GFF412	0.42	-0.3
81,427	+		GFF412	0.52	-0.2
81,446	-		GFF412	0.53	-0.0
81,712	+		GFF412	0.68	+0.1
81,712	+		GFF412	0.68	-0.2
81,757	+		GFF412	0.70	-0.3
81,757	+		GFF412	0.70	-0.9
81,757	+		GFF412	0.70	+0.2
81,758	-		GFF412	0.71	+0.1
81,758	-		GFF412	0.71	+0.4
81,758	-		GFF412	0.71	+0.0
81,784	+		GFF412	0.72	-0.2
81,785	-		GFF412	0.72	-0.8
81,814	+		GFF412	0.74	-0.1
81,814	+		GFF412	0.74	-0.5
81,815	-		GFF412	0.74	+0.7
81,815	-		GFF412	0.74	-1.0
81,815	-		GFF412	0.74	+0.2
81,815	-		GFF412	0.74	-0.0
82,063	+		GFF412	0.87	-0.5
82,063	+		GFF412	0.87	+1.2
82,064	-		GFF412	0.88	-0.0
82,097	-		GFF412	0.89	+0.2
82,162	+				+0.1
82,163	-				-0.5
82,163	-				-1.1
82,192	+				+0.2
82,192	+				-0.2
82,192	+				+1.5
82,285	+				-0.1
82,469	+		GFF413	0.34	+0.9
82,469	+		GFF413	0.34	+0.1
82,617	-		GFF413	0.67	-0.2
82,658	+		GFF413	0.77	+0.5
83,023	-				+0.4
83,023	-				+0.2
83,023	-				-2.2
83,106	+		GFF414	0.13	-0.1
83,106	+		GFF414	0.13	-0.6
83,157	-		GFF414	0.15	-0.0
83,251	-		GFF414	0.19	-0.3