Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2680

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
269,873	+		GFF2679	0.40	-0.0
269,874	-		GFF2679	0.40	-0.3
269,958	-		GFF2679	0.48	-0.6
270,117	-		GFF2679	0.61	-0.5
270,117	-		GFF2679	0.61	-0.0
270,135	-		GFF2679	0.63	-0.2
270,173	+		GFF2679	0.66	+1.1
270,176	+		GFF2679	0.66	+0.3
270,176	+		GFF2679	0.66	+1.0
270,176	+		GFF2679	0.66	+0.9
270,177	-		GFF2679	0.67	-0.2
270,583	-				-0.4
270,890	+		GFF2680	0.68	+0.2
270,891	-		GFF2680	0.69	+0.3
270,894	+		GFF2680	0.69	+1.7
270,895	-		GFF2680	0.69	-0.4
271,184	+				+0.2
271,397	+		GFF2681	0.21	+0.6
271,547	+		GFF2681	0.30	+1.2
271,790	+		GFF2681	0.44	-0.1
271,790	+		GFF2681	0.44	-0.1
272,027	+		GFF2681	0.58	+0.4
272,027	+		GFF2681	0.58	-0.0