Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF217

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
237,395	+				-0.1
237,395	+				-0.0
237,395	+				-2.7
237,396	-				-0.7
237,396	-				-0.4
237,396	-				+0.3
237,396	-				+0.3
237,401	+				+0.1
237,401	+				+0.1
237,401	+				+0.1
237,401	+				-0.2
237,401	+				+0.5
237,401	+				+0.6
237,401	+				-0.5
237,401	+				-0.0
237,401	+				-0.4
237,401	+				+0.1
237,401	+				-0.6
237,402	-				+0.1
237,402	-				-0.4
237,402	-				+0.1
237,402	-				+0.6
237,402	-				+0.1
237,402	-				-0.8
237,402	-				-0.6
237,402	-				+0.4
237,402	-				+0.1
237,402	-				+0.1
237,402	-				+0.6
237,402	-				+0.5
237,402	-				+0.3
237,402	-				-0.1
237,402	-				-0.7
237,410	+				-0.5
237,410	+				-0.2
237,410	+				-2.1
237,410	+				-0.1
237,411	-				-1.9
237,530	+		GFF216	0.18	-0.3
237,530	+		GFF216	0.18	+0.0
237,530	+		GFF216	0.18	+1.3
237,530	+		GFF216	0.18	+0.4
237,530	+		GFF216	0.18	+0.1
237,530	+		GFF216	0.18	-1.0
237,531	-		GFF216	0.18	-0.8
237,863	+		GFF216	0.51	+0.3
237,939	-		GFF216	0.58	+0.8
237,939	-		GFF216	0.58	-0.0
237,939	-		GFF216	0.58	+0.1
237,939	-		GFF216	0.58	-0.1
238,016	+		GFF216	0.66	+0.1
238,016	+		GFF216	0.66	+0.6
238,016	+		GFF216	0.66	+0.0
238,016	+		GFF216	0.66	+0.5
238,017	-		GFF216	0.66	-0.4
238,017	-		GFF216	0.66	-0.2
238,017	-		GFF216	0.66	+0.2
238,017	-		GFF216	0.66	+0.4
238,271	+				-0.7
238,289	+				-0.0
238,289	+				+0.3
238,290	-				+0.1
238,454	+				-0.4
238,454	+				+0.1
238,454	+				+0.1
238,455	-				+0.1
238,472	+				+0.3
238,473	-				+0.1
238,505	+				-0.1
238,506	-				+0.5
238,614	-		GFF217	0.17	+0.0
238,614	-		GFF217	0.17	-0.2
238,668	-		GFF217	0.21	+0.5
238,668	-		GFF217	0.21	-0.4
239,210	+		GFF217	0.61	+0.4
239,591	+		GFF217	0.89	-0.3
239,591	+		GFF217	0.89	-0.5
239,591	+		GFF217	0.89	+0.4
239,591	+		GFF217	0.89	-0.3
239,592	-		GFF217	0.89	+0.3
239,592	-		GFF217	0.89	+0.1
239,592	-		GFF217	0.89	-0.0
239,595	-		GFF217	0.89	-0.0
239,595	-		GFF217	0.89	+0.1
240,121	+		GFF218	0.64	-0.3
240,122	-		GFF218	0.64	-0.4
240,274	+				+0.8
240,274	+				+0.7
240,274	+				+1.5
240,274	+				-0.8
240,274	+				+0.1
240,275	-				-0.1
240,389	+				-0.6
240,390	-				+0.3
240,390	-				-0.1
240,390	-				+0.7
240,390	-				-0.9
240,480	+				-2.1
240,480	+				-0.4
240,480	+				-1.2
240,480	+				-0.2
240,480	+				+0.4
240,481	-				-0.6
240,481	-				+0.3
240,481	-				+0.2
240,481	-				+0.2