Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF143

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
157,980	+		GFF142	0.29	-0.0
158,184	+		GFF142	0.49	+0.2
158,461	-		GFF142	0.77	+0.3
158,652	+				+0.1
158,714	-				+0.1
158,747	+				+0.4
158,747	+				-0.0
158,747	+				-0.2
158,822	-				-1.4
158,822	-				-3.8
158,998	+		GFF143	0.18	-1.2
158,999	-		GFF143	0.18	-2.2
159,997	+				-1.1
159,998	-				-1.6
160,173	-				-0.5
160,959	+				-0.5
160,959	+				-0.7
160,960	-				+0.2