Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1025

Experiment: Ying_Nucleobase14 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 2
762,911	-		GFF1024	0.36	-1.0
762,911	-		GFF1024	0.36	+0.2
762,943	+		GFF1024	0.38	-0.1
762,943	+		GFF1024	0.38	+0.0
762,943	+		GFF1024	0.38	+0.1
762,944	-		GFF1024	0.38	-0.5
762,944	-		GFF1024	0.38	-0.1
762,944	-		GFF1024	0.38	+0.2
763,161	+		GFF1024	0.53	-0.3
763,161	+		GFF1024	0.53	-0.5
763,161	+		GFF1024	0.53	+0.9
763,825	+				-0.3
763,865	+				-0.5
763,925	+				+0.0
764,106	-		GFF1025	0.33	+0.0
764,148	+		GFF1025	0.39	-0.9
764,148	+		GFF1025	0.39	-1.5
764,148	+		GFF1025	0.39	+0.1
764,148	+		GFF1025	0.39	-1.4
764,676	+				-0.5
764,677	-				-0.2
764,710	+				-0.4
764,891	-		GFF1026	0.19	+0.3
765,538	+		GFF1026	0.74	+0.7