Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05293

Experiment: B-glucan from yeast 2.5 mg/mL (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBACOVA_05291 and BACOVA_05292 are separated by 5 nucleotidesBACOVA_05292 and BACOVA_05293 are separated by 38 nucleotidesBACOVA_05293 and BACOVA_05294 are separated by 131 nucleotides BACOVA_05291: BACOVA_05291 - hypothetical protein, at 784,429 to 784,824 _05291 BACOVA_05292: BACOVA_05292 - transporter, cation channel family protein, at 784,830 to 785,699 _05292 BACOVA_05293: BACOVA_05293 - transglycosylase SLT domain protein, at 785,738 to 786,718 _05293 BACOVA_05294: BACOVA_05294 - TIGR01777 family protein, at 786,850 to 788,163 _05294 Position (kb) 785 786 787Strain fitness (log2 ratio) -2 -1 0 1 2 3at 784.755 kb on + strand, within BACOVA_05291at 784.765 kb on + strand, within BACOVA_05291at 784.765 kb on + strand, within BACOVA_05291at 784.765 kb on + strand, within BACOVA_05291at 784.816 kb on - strandat 784.899 kb on - strandat 784.899 kb on - strandat 784.954 kb on + strand, within BACOVA_05292at 784.954 kb on + strand, within BACOVA_05292at 784.978 kb on - strand, within BACOVA_05292at 785.001 kb on - strand, within BACOVA_05292at 785.063 kb on + strand, within BACOVA_05292at 785.066 kb on + strand, within BACOVA_05292at 785.066 kb on + strand, within BACOVA_05292at 785.078 kb on + strand, within BACOVA_05292at 785.107 kb on + strand, within BACOVA_05292at 785.107 kb on + strand, within BACOVA_05292at 785.108 kb on - strand, within BACOVA_05292at 785.124 kb on - strand, within BACOVA_05292at 785.162 kb on + strand, within BACOVA_05292at 785.164 kb on + strand, within BACOVA_05292at 785.164 kb on + strand, within BACOVA_05292at 785.232 kb on - strand, within BACOVA_05292at 785.232 kb on - strand, within BACOVA_05292at 785.241 kb on + strand, within BACOVA_05292at 785.307 kb on + strand, within BACOVA_05292at 785.334 kb on + strand, within BACOVA_05292at 785.335 kb on - strand, within BACOVA_05292at 785.335 kb on - strand, within BACOVA_05292at 785.368 kb on + strand, within BACOVA_05292at 785.368 kb on + strand, within BACOVA_05292at 785.368 kb on + strand, within BACOVA_05292at 785.389 kb on - strand, within BACOVA_05292at 785.395 kb on - strand, within BACOVA_05292at 785.415 kb on + strand, within BACOVA_05292at 785.415 kb on + strand, within BACOVA_05292at 785.415 kb on + strand, within BACOVA_05292at 785.419 kb on + strand, within BACOVA_05292at 785.443 kb on + strand, within BACOVA_05292at 785.443 kb on + strand, within BACOVA_05292at 785.443 kb on + strand, within BACOVA_05292at 785.444 kb on - strand, within BACOVA_05292at 785.459 kb on - strand, within BACOVA_05292at 785.638 kb on + strandat 785.638 kb on + strandat 785.639 kb on - strandat 785.640 kb on + strandat 785.640 kb on + strandat 785.706 kb on - strandat 785.758 kb on + strandat 785.788 kb on - strandat 785.790 kb on + strandat 785.790 kb on + strandat 785.790 kb on + strandat 785.791 kb on - strandat 785.814 kb on + strandat 785.814 kb on + strandat 785.823 kb on + strandat 785.823 kb on + strandat 785.824 kb on - strandat 785.844 kb on + strand, within BACOVA_05293at 785.892 kb on + strand, within BACOVA_05293at 785.917 kb on - strand, within BACOVA_05293at 785.936 kb on - strand, within BACOVA_05293at 785.960 kb on - strand, within BACOVA_05293at 785.960 kb on - strand, within BACOVA_05293at 785.962 kb on - strand, within BACOVA_05293at 785.962 kb on - strand, within BACOVA_05293at 786.026 kb on + strand, within BACOVA_05293at 786.026 kb on + strand, within BACOVA_05293at 786.083 kb on + strand, within BACOVA_05293at 786.083 kb on + strand, within BACOVA_05293at 786.083 kb on + strand, within BACOVA_05293at 786.083 kb on + strand, within BACOVA_05293at 786.083 kb on + strand, within BACOVA_05293at 786.151 kb on - strand, within BACOVA_05293at 786.204 kb on + strand, within BACOVA_05293at 786.205 kb on - strand, within BACOVA_05293at 786.235 kb on + strand, within BACOVA_05293at 786.240 kb on + strand, within BACOVA_05293at 786.241 kb on - strand, within BACOVA_05293at 786.344 kb on - strand, within BACOVA_05293at 786.344 kb on - strand, within BACOVA_05293at 786.372 kb on + strand, within BACOVA_05293at 786.373 kb on - strand, within BACOVA_05293at 786.391 kb on + strand, within BACOVA_05293at 786.452 kb on + strand, within BACOVA_05293at 786.453 kb on - strand, within BACOVA_05293at 786.472 kb on + strand, within BACOVA_05293at 786.473 kb on - strand, within BACOVA_05293at 786.473 kb on - strand, within BACOVA_05293at 786.474 kb on + strand, within BACOVA_05293at 786.475 kb on - strand, within BACOVA_05293at 786.589 kb on - strand, within BACOVA_05293at 786.680 kb on - strandat 786.686 kb on - strandat 786.691 kb on + strandat 786.691 kb on + strandat 786.691 kb on + strandat 786.692 kb on - strandat 786.721 kb on + strandat 786.723 kb on + strandat 786.749 kb on - strandat 786.749 kb on - strandat 786.808 kb on + strandat 786.829 kb on + strandat 786.857 kb on + strandat 786.858 kb on - strandat 786.881 kb on - strandat 786.882 kb on + strandat 786.885 kb on - strandat 786.885 kb on - strandat 786.885 kb on - strandat 786.900 kb on + strandat 786.901 kb on - strandat 786.904 kb on + strandat 786.904 kb on + strandat 786.967 kb on - strandat 786.967 kb on - strandat 787.032 kb on + strand, within BACOVA_05294at 787.032 kb on + strand, within BACOVA_05294at 787.032 kb on + strand, within BACOVA_05294at 787.033 kb on - strand, within BACOVA_05294at 787.059 kb on + strand, within BACOVA_05294at 787.084 kb on - strand, within BACOVA_05294at 787.163 kb on + strand, within BACOVA_05294at 787.171 kb on + strand, within BACOVA_05294at 787.201 kb on - strand, within BACOVA_05294at 787.241 kb on - strand, within BACOVA_05294at 787.278 kb on + strand, within BACOVA_05294at 787.278 kb on + strand, within BACOVA_05294at 787.414 kb on + strand, within BACOVA_05294at 787.475 kb on + strand, within BACOVA_05294at 787.476 kb on - strand, within BACOVA_05294at 787.476 kb on - strand, within BACOVA_05294at 787.477 kb on + strand, within BACOVA_05294at 787.478 kb on - strand, within BACOVA_05294at 787.479 kb on + strand, within BACOVA_05294at 787.480 kb on - strand, within BACOVA_05294at 787.480 kb on - strand, within BACOVA_05294at 787.480 kb on - strand, within BACOVA_05294at 787.510 kb on + strand, within BACOVA_05294at 787.562 kb on + strand, within BACOVA_05294at 787.589 kb on + strand, within BACOVA_05294at 787.589 kb on + strand, within BACOVA_05294at 787.590 kb on - strand, within BACOVA_05294at 787.590 kb on - strand, within BACOVA_05294at 787.590 kb on - strand, within BACOVA_05294at 787.590 kb on - strand, within BACOVA_05294at 787.590 kb on - strand, within BACOVA_05294at 787.590 kb on - strand, within BACOVA_05294at 787.591 kb on + strand, within BACOVA_05294at 787.592 kb on - strand, within BACOVA_05294at 787.710 kb on + strand, within BACOVA_05294at 787.713 kb on + strand, within BACOVA_05294at 787.714 kb on - strand, within BACOVA_05294at 787.714 kb on - strand, within BACOVA_05294at 787.714 kb on - strand, within BACOVA_05294

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction B-glucan from yeast 2.5 mg/mL (C)
remove
784,755 + BACOVA_05291 0.82 +0.9
784,765 + BACOVA_05291 0.85 -1.7
784,765 + BACOVA_05291 0.85 -0.5
784,765 + BACOVA_05291 0.85 +0.0
784,816 - -0.6
784,899 - +1.0
784,899 - +0.3
784,954 + BACOVA_05292 0.14 -0.8
784,954 + BACOVA_05292 0.14 -0.1
784,978 - BACOVA_05292 0.17 -0.3
785,001 - BACOVA_05292 0.20 +0.5
785,063 + BACOVA_05292 0.27 -0.5
785,066 + BACOVA_05292 0.27 -1.2
785,066 + BACOVA_05292 0.27 +1.2
785,078 + BACOVA_05292 0.29 -0.2
785,107 + BACOVA_05292 0.32 -0.2
785,107 + BACOVA_05292 0.32 -1.4
785,108 - BACOVA_05292 0.32 +0.3
785,124 - BACOVA_05292 0.34 -2.4
785,162 + BACOVA_05292 0.38 -0.2
785,164 + BACOVA_05292 0.38 -0.0
785,164 + BACOVA_05292 0.38 -1.2
785,232 - BACOVA_05292 0.46 +1.9
785,232 - BACOVA_05292 0.46 -0.2
785,241 + BACOVA_05292 0.47 +0.4
785,307 + BACOVA_05292 0.55 -0.4
785,334 + BACOVA_05292 0.58 +0.4
785,335 - BACOVA_05292 0.58 -0.1
785,335 - BACOVA_05292 0.58 +1.8
785,368 + BACOVA_05292 0.62 -0.5
785,368 + BACOVA_05292 0.62 +0.2
785,368 + BACOVA_05292 0.62 +0.4
785,389 - BACOVA_05292 0.64 -0.3
785,395 - BACOVA_05292 0.65 +0.4
785,415 + BACOVA_05292 0.67 +0.1
785,415 + BACOVA_05292 0.67 -1.1
785,415 + BACOVA_05292 0.67 +2.5
785,419 + BACOVA_05292 0.68 -0.2
785,443 + BACOVA_05292 0.70 +0.0
785,443 + BACOVA_05292 0.70 -1.6
785,443 + BACOVA_05292 0.70 +2.7
785,444 - BACOVA_05292 0.71 +1.1
785,459 - BACOVA_05292 0.72 +0.2
785,638 + -0.3
785,638 + +0.8
785,639 - -0.2
785,640 + +0.9
785,640 + -0.7
785,706 - -0.1
785,758 + +0.6
785,788 - +0.2
785,790 + -2.5
785,790 + +0.2
785,790 + +1.9
785,791 - -0.1
785,814 + +0.6
785,814 + +0.3
785,823 + -0.8
785,823 + +1.3
785,824 - -0.1
785,844 + BACOVA_05293 0.11 +3.1
785,892 + BACOVA_05293 0.16 +0.4
785,917 - BACOVA_05293 0.18 -0.7
785,936 - BACOVA_05293 0.20 +0.5
785,960 - BACOVA_05293 0.23 +0.3
785,960 - BACOVA_05293 0.23 -0.4
785,962 - BACOVA_05293 0.23 +1.0
785,962 - BACOVA_05293 0.23 -0.6
786,026 + BACOVA_05293 0.29 -0.5
786,026 + BACOVA_05293 0.29 -0.0
786,083 + BACOVA_05293 0.35 +1.5
786,083 + BACOVA_05293 0.35 -0.2
786,083 + BACOVA_05293 0.35 +1.3
786,083 + BACOVA_05293 0.35 +0.1
786,083 + BACOVA_05293 0.35 -0.4
786,151 - BACOVA_05293 0.42 +0.1
786,204 + BACOVA_05293 0.48 +0.4
786,205 - BACOVA_05293 0.48 +0.1
786,235 + BACOVA_05293 0.51 +0.9
786,240 + BACOVA_05293 0.51 +0.1
786,241 - BACOVA_05293 0.51 +2.4
786,344 - BACOVA_05293 0.62 +0.7
786,344 - BACOVA_05293 0.62 +0.9
786,372 + BACOVA_05293 0.65 -0.2
786,373 - BACOVA_05293 0.65 -0.1
786,391 + BACOVA_05293 0.67 +1.2
786,452 + BACOVA_05293 0.73 +0.3
786,453 - BACOVA_05293 0.73 +0.4
786,472 + BACOVA_05293 0.75 +1.8
786,473 - BACOVA_05293 0.75 +1.6
786,473 - BACOVA_05293 0.75 +0.6
786,474 + BACOVA_05293 0.75 -1.3
786,475 - BACOVA_05293 0.75 +0.9
786,589 - BACOVA_05293 0.87 +0.6
786,680 - +0.5
786,686 - -0.1
786,691 + -0.4
786,691 + +0.7
786,691 + -1.1
786,692 - +0.1
786,721 + +1.4
786,723 + -1.1
786,749 - +0.1
786,749 - +0.5
786,808 + -1.1
786,829 + -0.6
786,857 + -0.0
786,858 - +0.4
786,881 - +0.0
786,882 + -0.1
786,885 - -0.9
786,885 - +0.9
786,885 - +0.5
786,900 + -0.3
786,901 - -0.6
786,904 + +1.7
786,904 + -0.4
786,967 - -2.1
786,967 - +0.6
787,032 + BACOVA_05294 0.14 -2.6
787,032 + BACOVA_05294 0.14 +1.7
787,032 + BACOVA_05294 0.14 -0.6
787,033 - BACOVA_05294 0.14 +1.7
787,059 + BACOVA_05294 0.16 +1.3
787,084 - BACOVA_05294 0.18 -0.9
787,163 + BACOVA_05294 0.24 +0.2
787,171 + BACOVA_05294 0.24 +0.4
787,201 - BACOVA_05294 0.27 -1.7
787,241 - BACOVA_05294 0.30 -0.1
787,278 + BACOVA_05294 0.33 +0.9
787,278 + BACOVA_05294 0.33 +1.9
787,414 + BACOVA_05294 0.43 -0.4
787,475 + BACOVA_05294 0.48 -1.6
787,476 - BACOVA_05294 0.48 -0.2
787,476 - BACOVA_05294 0.48 +0.3
787,477 + BACOVA_05294 0.48 +0.0
787,478 - BACOVA_05294 0.48 -1.0
787,479 + BACOVA_05294 0.48 +0.5
787,480 - BACOVA_05294 0.48 +1.0
787,480 - BACOVA_05294 0.48 +0.8
787,480 - BACOVA_05294 0.48 +0.4
787,510 + BACOVA_05294 0.50 -0.3
787,562 + BACOVA_05294 0.54 +0.6
787,589 + BACOVA_05294 0.56 +0.3
787,589 + BACOVA_05294 0.56 -0.3
787,590 - BACOVA_05294 0.56 +1.5
787,590 - BACOVA_05294 0.56 +1.0
787,590 - BACOVA_05294 0.56 +0.4
787,590 - BACOVA_05294 0.56 +0.4
787,590 - BACOVA_05294 0.56 -0.7
787,590 - BACOVA_05294 0.56 +0.1
787,591 + BACOVA_05294 0.56 +1.0
787,592 - BACOVA_05294 0.56 +0.6
787,710 + BACOVA_05294 0.65 +0.8
787,713 + BACOVA_05294 0.66 +0.3
787,714 - BACOVA_05294 0.66 -0.3
787,714 - BACOVA_05294 0.66 +0.0
787,714 - BACOVA_05294 0.66 -0.8

Or see this region's nucleotide sequence