Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04449

Experiment: B-glucan from yeast 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04448 and BACOVA_04449 are separated by 48 nucleotidesBACOVA_04449 and BACOVA_04450 are separated by 107 nucleotidesBACOVA_04450 and BACOVA_04451 overlap by 11 nucleotidesBACOVA_04451 and BACOVA_04452 are separated by 76 nucleotides BACOVA_04448: BACOVA_04448 - putative ATP synthase F0, A subunit, at 359,437 to 362,469 _04448 BACOVA_04449: BACOVA_04449 - outer membrane efflux protein, at 362,518 to 363,789 _04449 BACOVA_04450: BACOVA_04450 - hypothetical protein, at 363,897 to 364,238 _04450 BACOVA_04451: BACOVA_04451 - hypothetical protein, at 364,228 to 364,518 _04451 BACOVA_04452: BACOVA_04452 - sodium ion-translocating decarboxylase, beta subunit, at 364,595 to 365,830 _04452 Position (kb) 362 363 364Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 361.547 kb on + strand, within BACOVA_04448at 361.559 kb on + strand, within BACOVA_04448at 361.559 kb on + strand, within BACOVA_04448at 361.560 kb on - strand, within BACOVA_04448at 361.560 kb on - strand, within BACOVA_04448at 361.561 kb on + strand, within BACOVA_04448at 361.562 kb on - strand, within BACOVA_04448at 361.562 kb on - strand, within BACOVA_04448at 361.563 kb on + strand, within BACOVA_04448at 361.618 kb on - strand, within BACOVA_04448at 361.680 kb on + strand, within BACOVA_04448at 361.680 kb on + strand, within BACOVA_04448at 361.680 kb on + strand, within BACOVA_04448at 361.681 kb on - strand, within BACOVA_04448at 361.828 kb on + strand, within BACOVA_04448at 361.828 kb on + strand, within BACOVA_04448at 361.929 kb on + strand, within BACOVA_04448at 361.947 kb on + strand, within BACOVA_04448at 361.958 kb on - strand, within BACOVA_04448at 362.066 kb on - strand, within BACOVA_04448at 362.138 kb on + strand, within BACOVA_04448at 362.183 kb on + strandat 362.242 kb on - strandat 362.281 kb on - strandat 362.293 kb on - strandat 362.304 kb on - strandat 362.440 kb on + strandat 362.441 kb on - strandat 362.483 kb on + strandat 362.483 kb on + strandat 362.484 kb on - strandat 362.498 kb on + strandat 362.532 kb on + strandat 362.532 kb on + strandat 362.532 kb on + strandat 362.610 kb on + strandat 362.623 kb on + strandat 362.623 kb on + strandat 362.668 kb on - strand, within BACOVA_04449at 362.779 kb on + strand, within BACOVA_04449at 362.780 kb on - strand, within BACOVA_04449at 362.790 kb on + strand, within BACOVA_04449at 362.791 kb on - strand, within BACOVA_04449at 362.794 kb on + strand, within BACOVA_04449at 362.794 kb on + strand, within BACOVA_04449at 362.794 kb on + strand, within BACOVA_04449at 362.805 kb on - strand, within BACOVA_04449at 362.805 kb on - strand, within BACOVA_04449at 362.904 kb on + strand, within BACOVA_04449at 362.967 kb on + strand, within BACOVA_04449at 362.968 kb on - strand, within BACOVA_04449at 362.990 kb on - strand, within BACOVA_04449at 362.990 kb on - strand, within BACOVA_04449at 362.990 kb on - strand, within BACOVA_04449at 362.990 kb on - strand, within BACOVA_04449at 362.997 kb on + strand, within BACOVA_04449at 362.997 kb on + strand, within BACOVA_04449at 363.014 kb on - strand, within BACOVA_04449at 363.014 kb on - strand, within BACOVA_04449at 363.045 kb on + strand, within BACOVA_04449at 363.045 kb on + strand, within BACOVA_04449at 363.052 kb on - strand, within BACOVA_04449at 363.052 kb on - strand, within BACOVA_04449at 363.065 kb on + strand, within BACOVA_04449at 363.066 kb on - strand, within BACOVA_04449at 363.107 kb on - strand, within BACOVA_04449at 363.108 kb on + strand, within BACOVA_04449at 363.127 kb on + strand, within BACOVA_04449at 363.127 kb on + strand, within BACOVA_04449at 363.127 kb on + strand, within BACOVA_04449at 363.128 kb on - strand, within BACOVA_04449at 363.248 kb on + strand, within BACOVA_04449at 363.249 kb on - strand, within BACOVA_04449at 363.268 kb on + strand, within BACOVA_04449at 363.289 kb on - strand, within BACOVA_04449at 363.348 kb on + strand, within BACOVA_04449at 363.348 kb on + strand, within BACOVA_04449at 363.353 kb on - strand, within BACOVA_04449at 363.353 kb on - strand, within BACOVA_04449at 363.353 kb on - strand, within BACOVA_04449at 363.436 kb on - strand, within BACOVA_04449at 363.437 kb on + strand, within BACOVA_04449at 363.438 kb on - strand, within BACOVA_04449at 363.490 kb on + strand, within BACOVA_04449at 363.491 kb on - strand, within BACOVA_04449at 363.609 kb on + strand, within BACOVA_04449at 363.652 kb on + strand, within BACOVA_04449at 363.653 kb on - strand, within BACOVA_04449at 363.653 kb on - strand, within BACOVA_04449at 363.672 kb on + strandat 363.673 kb on - strandat 363.720 kb on + strandat 363.736 kb on + strandat 363.824 kb on + strandat 363.857 kb on + strandat 363.858 kb on - strandat 363.885 kb on - strandat 363.886 kb on + strandat 363.891 kb on + strandat 363.892 kb on - strandat 363.892 kb on - strandat 363.898 kb on + strandat 363.924 kb on - strandat 363.924 kb on - strandat 363.931 kb on - strandat 363.939 kb on - strand, within BACOVA_04450at 363.939 kb on - strand, within BACOVA_04450at 363.970 kb on + strand, within BACOVA_04450at 363.971 kb on - strand, within BACOVA_04450at 364.019 kb on + strand, within BACOVA_04450at 364.050 kb on - strand, within BACOVA_04450at 364.069 kb on - strand, within BACOVA_04450at 364.077 kb on - strand, within BACOVA_04450at 364.080 kb on + strand, within BACOVA_04450at 364.081 kb on - strand, within BACOVA_04450at 364.094 kb on + strand, within BACOVA_04450at 364.125 kb on + strand, within BACOVA_04450at 364.125 kb on + strand, within BACOVA_04450at 364.312 kb on + strand, within BACOVA_04451at 364.491 kb on + strandat 364.491 kb on + strandat 364.512 kb on + strandat 364.564 kb on + strandat 364.591 kb on + strandat 364.592 kb on - strandat 364.592 kb on - strandat 364.597 kb on - strandat 364.644 kb on - strandat 364.672 kb on - strandat 364.721 kb on + strand, within BACOVA_04452

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Per-strain Table

Position Strand Gene LocusTag Fraction B-glucan from yeast 2.5 mg/mL (C)
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361,547 + BACOVA_04448 0.70 +0.6
361,559 + BACOVA_04448 0.70 -1.3
361,559 + BACOVA_04448 0.70 +0.4
361,560 - BACOVA_04448 0.70 +3.1
361,560 - BACOVA_04448 0.70 -0.6
361,561 + BACOVA_04448 0.70 -1.3
361,562 - BACOVA_04448 0.70 -0.3
361,562 - BACOVA_04448 0.70 +0.4
361,563 + BACOVA_04448 0.70 +1.0
361,618 - BACOVA_04448 0.72 +0.4
361,680 + BACOVA_04448 0.74 +1.0
361,680 + BACOVA_04448 0.74 +1.3
361,680 + BACOVA_04448 0.74 -1.1
361,681 - BACOVA_04448 0.74 -1.6
361,828 + BACOVA_04448 0.79 +0.2
361,828 + BACOVA_04448 0.79 -2.7
361,929 + BACOVA_04448 0.82 -0.3
361,947 + BACOVA_04448 0.83 +0.5
361,958 - BACOVA_04448 0.83 -0.2
362,066 - BACOVA_04448 0.87 +1.1
362,138 + BACOVA_04448 0.89 -0.2
362,183 + +1.0
362,242 - -1.2
362,281 - +0.2
362,293 - -0.7
362,304 - -1.0
362,440 + +0.6
362,441 - -0.3
362,483 + +0.9
362,483 + +0.8
362,484 - -0.2
362,498 + +0.3
362,532 + -3.1
362,532 + -1.0
362,532 + +0.1
362,610 + -1.8
362,623 + -0.0
362,623 + -1.3
362,668 - BACOVA_04449 0.12 +1.3
362,779 + BACOVA_04449 0.21 +1.9
362,780 - BACOVA_04449 0.21 -0.2
362,790 + BACOVA_04449 0.21 +0.8
362,791 - BACOVA_04449 0.21 -1.2
362,794 + BACOVA_04449 0.22 -0.5
362,794 + BACOVA_04449 0.22 -1.1
362,794 + BACOVA_04449 0.22 -1.3
362,805 - BACOVA_04449 0.23 +0.2
362,805 - BACOVA_04449 0.23 -0.2
362,904 + BACOVA_04449 0.30 -3.4
362,967 + BACOVA_04449 0.35 +0.1
362,968 - BACOVA_04449 0.35 +0.2
362,990 - BACOVA_04449 0.37 +0.9
362,990 - BACOVA_04449 0.37 -0.2
362,990 - BACOVA_04449 0.37 -0.3
362,990 - BACOVA_04449 0.37 +0.4
362,997 + BACOVA_04449 0.38 -0.4
362,997 + BACOVA_04449 0.38 +1.0
363,014 - BACOVA_04449 0.39 +0.1
363,014 - BACOVA_04449 0.39 -1.9
363,045 + BACOVA_04449 0.41 +0.2
363,045 + BACOVA_04449 0.41 -1.5
363,052 - BACOVA_04449 0.42 +1.1
363,052 - BACOVA_04449 0.42 +0.9
363,065 + BACOVA_04449 0.43 +0.4
363,066 - BACOVA_04449 0.43 -1.0
363,107 - BACOVA_04449 0.46 +1.6
363,108 + BACOVA_04449 0.46 +1.1
363,127 + BACOVA_04449 0.48 +0.2
363,127 + BACOVA_04449 0.48 +0.8
363,127 + BACOVA_04449 0.48 -0.1
363,128 - BACOVA_04449 0.48 -0.1
363,248 + BACOVA_04449 0.57 -0.3
363,249 - BACOVA_04449 0.57 +0.5
363,268 + BACOVA_04449 0.59 -0.1
363,289 - BACOVA_04449 0.61 -0.1
363,348 + BACOVA_04449 0.65 -0.3
363,348 + BACOVA_04449 0.65 -0.2
363,353 - BACOVA_04449 0.66 -1.0
363,353 - BACOVA_04449 0.66 -0.4
363,353 - BACOVA_04449 0.66 +0.2
363,436 - BACOVA_04449 0.72 -0.3
363,437 + BACOVA_04449 0.72 +1.3
363,438 - BACOVA_04449 0.72 +0.9
363,490 + BACOVA_04449 0.76 +0.8
363,491 - BACOVA_04449 0.76 +0.9
363,609 + BACOVA_04449 0.86 +0.5
363,652 + BACOVA_04449 0.89 -1.3
363,653 - BACOVA_04449 0.89 -2.1
363,653 - BACOVA_04449 0.89 +0.9
363,672 + -0.5
363,673 - -1.0
363,720 + -1.7
363,736 + +0.7
363,824 + -0.0
363,857 + +0.3
363,858 - +0.5
363,885 - +0.3
363,886 + +0.6
363,891 + +2.0
363,892 - +1.7
363,892 - +0.7
363,898 + -0.7
363,924 - -0.0
363,924 - -0.9
363,931 - +0.4
363,939 - BACOVA_04450 0.12 +0.2
363,939 - BACOVA_04450 0.12 +0.3
363,970 + BACOVA_04450 0.21 +0.3
363,971 - BACOVA_04450 0.22 +0.5
364,019 + BACOVA_04450 0.36 +1.0
364,050 - BACOVA_04450 0.45 +1.7
364,069 - BACOVA_04450 0.50 -0.0
364,077 - BACOVA_04450 0.53 -0.5
364,080 + BACOVA_04450 0.54 -0.8
364,081 - BACOVA_04450 0.54 +0.4
364,094 + BACOVA_04450 0.58 -0.4
364,125 + BACOVA_04450 0.67 +1.6
364,125 + BACOVA_04450 0.67 -0.1
364,312 + BACOVA_04451 0.29 +1.1
364,491 + +0.3
364,491 + +1.0
364,512 + -0.7
364,564 + +0.0
364,591 + +0.5
364,592 - +1.1
364,592 - +1.0
364,597 - +0.8
364,644 - +1.8
364,672 - -0.4
364,721 + BACOVA_04452 0.10 +0.4

Or see this region's nucleotide sequence