Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04436

Experiment: B-glucan from yeast 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04434 and BACOVA_04435 are separated by 53 nucleotidesBACOVA_04435 and BACOVA_04436 are separated by 11 nucleotidesBACOVA_04436 and BACOVA_04437 are separated by 433 nucleotidesBACOVA_04437 and BACOVA_04438 are separated by 80 nucleotides BACOVA_04434: BACOVA_04434 - sodium ion-translocating decarboxylase, beta subunit, at 351,123 to 352,283 _04434 BACOVA_04435: BACOVA_04435 - hypothetical protein, at 352,337 to 352,456 _04435 BACOVA_04436: BACOVA_04436 - fructose-1,6-bisphosphate aldolase, class II, at 352,468 to 353,472 _04436 BACOVA_04437: BACOVA_04437 - ribosomal protein L31, at 353,906 to 354,160 _04437 BACOVA_04438: BACOVA_04438 - hypothetical protein, at 354,241 to 355,455 _04438 Position (kb) 352 353 354Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 351.521 kb on + strand, within BACOVA_04434at 351.566 kb on + strand, within BACOVA_04434at 351.569 kb on - strand, within BACOVA_04434at 351.573 kb on - strand, within BACOVA_04434at 351.622 kb on + strand, within BACOVA_04434at 351.622 kb on + strand, within BACOVA_04434at 351.667 kb on - strand, within BACOVA_04434at 351.669 kb on - strand, within BACOVA_04434at 351.688 kb on + strand, within BACOVA_04434at 351.998 kb on + strand, within BACOVA_04434at 352.034 kb on + strand, within BACOVA_04434at 352.097 kb on + strand, within BACOVA_04434at 352.098 kb on - strand, within BACOVA_04434at 352.098 kb on - strand, within BACOVA_04434at 352.154 kb on + strand, within BACOVA_04434at 352.194 kb on + strandat 352.281 kb on + strandat 352.295 kb on + strandat 352.295 kb on + strandat 352.296 kb on - strandat 352.302 kb on + strandat 352.345 kb on + strandat 352.348 kb on + strandat 352.356 kb on + strand, within BACOVA_04435at 352.356 kb on + strand, within BACOVA_04435at 352.356 kb on + strand, within BACOVA_04435at 352.356 kb on + strand, within BACOVA_04435at 352.356 kb on + strand, within BACOVA_04435at 352.356 kb on + strand, within BACOVA_04435at 352.356 kb on + strand, within BACOVA_04435at 352.357 kb on - strand, within BACOVA_04435at 352.363 kb on - strand, within BACOVA_04435at 352.410 kb on - strand, within BACOVA_04435at 352.448 kb on - strandat 352.448 kb on - strandat 352.467 kb on - strandat 352.467 kb on - strandat 352.470 kb on - strandat 353.509 kb on - strandat 353.509 kb on - strandat 353.519 kb on - strandat 353.519 kb on - strandat 353.617 kb on + strandat 353.618 kb on - strandat 353.653 kb on - strandat 353.688 kb on - strandat 353.690 kb on - strandat 353.690 kb on - strandat 353.701 kb on + strandat 353.702 kb on - strandat 353.702 kb on - strandat 353.703 kb on + strandat 353.708 kb on + strandat 353.709 kb on - strandat 353.712 kb on + strandat 353.712 kb on + strandat 353.752 kb on + strandat 353.854 kb on + strandat 354.158 kb on + strandat 354.227 kb on + strandat 354.228 kb on - strandat 354.228 kb on - strandat 354.325 kb on + strandat 354.325 kb on + strandat 354.325 kb on + strandat 354.325 kb on + strandat 354.329 kb on + strandat 354.329 kb on + strandat 354.330 kb on - strandat 354.330 kb on - strandat 354.330 kb on - strandat 354.404 kb on + strand, within BACOVA_04438at 354.404 kb on + strand, within BACOVA_04438at 354.405 kb on - strand, within BACOVA_04438at 354.409 kb on + strand, within BACOVA_04438at 354.419 kb on + strand, within BACOVA_04438

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Per-strain Table

Position Strand Gene LocusTag Fraction B-glucan from yeast 2.5 mg/mL (C)
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351,521 + BACOVA_04434 0.34 -0.2
351,566 + BACOVA_04434 0.38 -2.8
351,569 - BACOVA_04434 0.38 +1.1
351,573 - BACOVA_04434 0.39 -1.2
351,622 + BACOVA_04434 0.43 +1.0
351,622 + BACOVA_04434 0.43 +0.8
351,667 - BACOVA_04434 0.47 -0.6
351,669 - BACOVA_04434 0.47 -0.1
351,688 + BACOVA_04434 0.49 +1.2
351,998 + BACOVA_04434 0.75 -1.2
352,034 + BACOVA_04434 0.78 -1.0
352,097 + BACOVA_04434 0.84 -0.7
352,098 - BACOVA_04434 0.84 -0.3
352,098 - BACOVA_04434 0.84 -0.8
352,154 + BACOVA_04434 0.89 -0.2
352,194 + -2.0
352,281 + -0.2
352,295 + +0.9
352,295 + +0.0
352,296 - -0.6
352,302 + -1.3
352,345 + +0.7
352,348 + -1.0
352,356 + BACOVA_04435 0.16 -0.1
352,356 + BACOVA_04435 0.16 +1.1
352,356 + BACOVA_04435 0.16 -0.5
352,356 + BACOVA_04435 0.16 -0.6
352,356 + BACOVA_04435 0.16 +0.7
352,356 + BACOVA_04435 0.16 -0.6
352,356 + BACOVA_04435 0.16 +1.3
352,357 - BACOVA_04435 0.17 +0.6
352,363 - BACOVA_04435 0.22 -1.0
352,410 - BACOVA_04435 0.61 -0.8
352,448 - +0.7
352,448 - +0.2
352,467 - -2.0
352,467 - -0.0
352,470 - +0.3
353,509 - -1.9
353,509 - -0.3
353,519 - -2.0
353,519 - -0.1
353,617 + -0.0
353,618 - +1.3
353,653 - -0.0
353,688 - +0.1
353,690 - -2.0
353,690 - +0.7
353,701 + +0.8
353,702 - -0.7
353,702 - +0.2
353,703 + -0.8
353,708 + -0.2
353,709 - +0.7
353,712 + -0.8
353,712 + -0.4
353,752 + -0.2
353,854 + -3.1
354,158 + -0.1
354,227 + +0.6
354,228 - +0.4
354,228 - +1.3
354,325 + -0.8
354,325 + -0.8
354,325 + -0.2
354,325 + -1.1
354,329 + -0.0
354,329 + +0.1
354,330 - +0.8
354,330 - -0.9
354,330 - +0.2
354,404 + BACOVA_04438 0.13 -0.3
354,404 + BACOVA_04438 0.13 -0.1
354,405 - BACOVA_04438 0.13 +2.0
354,409 + BACOVA_04438 0.14 -2.3
354,419 + BACOVA_04438 0.15 +2.0

Or see this region's nucleotide sequence