Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01902

Experiment: B-glucan from yeast 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01900 and BACOVA_01901 overlap by 20 nucleotidesBACOVA_01901 and BACOVA_01902 are separated by 73 nucleotidesBACOVA_01902 and BACOVA_01903 are separated by 91 nucleotides BACOVA_01900: BACOVA_01900 - FeS assembly protein SufB, at 105,994 to 107,493 _01900 BACOVA_01901: BACOVA_01901 - CvpA family protein, at 107,474 to 108,121 _01901 BACOVA_01902: BACOVA_01902 - translation initiation factor IF-2, at 108,195 to 111,293 _01902 BACOVA_01903: BACOVA_01903 - transcription termination factor NusA, at 111,385 to 112,680 _01903 Position (kb) 108 109 110 111 112Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 107.514 kb on - strandat 107.514 kb on - strandat 107.514 kb on - strandat 107.514 kb on - strandat 107.516 kb on - strandat 107.518 kb on - strandat 107.518 kb on - strandat 107.581 kb on - strand, within BACOVA_01901at 107.581 kb on - strand, within BACOVA_01901at 107.581 kb on - strand, within BACOVA_01901at 107.581 kb on - strand, within BACOVA_01901at 107.583 kb on - strand, within BACOVA_01901at 107.658 kb on - strand, within BACOVA_01901at 107.681 kb on - strand, within BACOVA_01901at 107.875 kb on - strand, within BACOVA_01901at 107.875 kb on - strand, within BACOVA_01901at 107.946 kb on - strand, within BACOVA_01901at 107.976 kb on - strand, within BACOVA_01901at 107.987 kb on - strand, within BACOVA_01901at 107.987 kb on - strand, within BACOVA_01901at 107.987 kb on - strand, within BACOVA_01901at 107.991 kb on - strand, within BACOVA_01901at 107.991 kb on - strand, within BACOVA_01901at 108.015 kb on - strand, within BACOVA_01901at 108.015 kb on - strand, within BACOVA_01901at 108.022 kb on - strand, within BACOVA_01901at 108.022 kb on - strand, within BACOVA_01901at 108.022 kb on - strand, within BACOVA_01901at 108.022 kb on - strand, within BACOVA_01901at 108.027 kb on - strand, within BACOVA_01901at 108.037 kb on - strand, within BACOVA_01901at 108.044 kb on - strand, within BACOVA_01901at 108.048 kb on - strand, within BACOVA_01901at 108.048 kb on - strand, within BACOVA_01901at 108.059 kb on - strandat 108.080 kb on - strandat 108.125 kb on - strandat 108.156 kb on - strandat 108.161 kb on - strandat 108.161 kb on - strandat 108.161 kb on - strandat 108.161 kb on - strandat 108.161 kb on - strandat 108.163 kb on - strandat 108.169 kb on - strandat 108.174 kb on - strandat 108.180 kb on - strandat 108.180 kb on - strandat 111.352 kb on - strandat 111.352 kb on - strandat 111.394 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction B-glucan from yeast 2.5 mg/mL (C)
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107,514 - +1.9
107,514 - +0.5
107,514 - -2.3
107,514 - -0.6
107,516 - +1.7
107,518 - -2.0
107,518 - -1.0
107,581 - BACOVA_01901 0.17 +0.4
107,581 - BACOVA_01901 0.17 -0.3
107,581 - BACOVA_01901 0.17 -1.0
107,581 - BACOVA_01901 0.17 +0.4
107,583 - BACOVA_01901 0.17 -0.5
107,658 - BACOVA_01901 0.28 -0.3
107,681 - BACOVA_01901 0.32 -0.5
107,875 - BACOVA_01901 0.62 -0.7
107,875 - BACOVA_01901 0.62 -1.0
107,946 - BACOVA_01901 0.73 -2.1
107,976 - BACOVA_01901 0.77 +1.6
107,987 - BACOVA_01901 0.79 -1.8
107,987 - BACOVA_01901 0.79 -0.5
107,987 - BACOVA_01901 0.79 -1.1
107,991 - BACOVA_01901 0.80 +1.2
107,991 - BACOVA_01901 0.80 -1.4
108,015 - BACOVA_01901 0.83 -1.7
108,015 - BACOVA_01901 0.83 -0.3
108,022 - BACOVA_01901 0.85 -1.4
108,022 - BACOVA_01901 0.85 -1.5
108,022 - BACOVA_01901 0.85 +0.3
108,022 - BACOVA_01901 0.85 -0.2
108,027 - BACOVA_01901 0.85 -1.4
108,037 - BACOVA_01901 0.87 -1.5
108,044 - BACOVA_01901 0.88 +0.3
108,048 - BACOVA_01901 0.89 -0.1
108,048 - BACOVA_01901 0.89 -0.2
108,059 - +1.1
108,080 - -0.9
108,125 - -1.5
108,156 - +1.7
108,161 - -1.3
108,161 - +0.6
108,161 - -0.7
108,161 - -0.3
108,161 - -0.3
108,163 - -0.5
108,169 - +0.4
108,174 - +0.3
108,180 - +0.9
108,180 - +0.9
111,352 - -1.8
111,352 - -1.1
111,394 - -3.0

Or see this region's nucleotide sequence