Experiment: B-glucan from yeast 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00752 and BACOVA_00753 are separated by 72 nucleotides BACOVA_00753 and BACOVA_00754 overlap by 7 nucleotides BACOVA_00754 and BACOVA_00755 are separated by 137 nucleotides BACOVA_00755 and BACOVA_00756 are separated by 388 nucleotides BACOVA_00756 and BACOVA_00757 are separated by 253 nucleotides
BACOVA_00752: BACOVA_00752 - proline--tRNA ligase, at 431,730 to 433,223
_00752
BACOVA_00753: BACOVA_00753 - hypothetical protein, at 433,296 to 433,400
_00753
BACOVA_00754: BACOVA_00754 - hypothetical protein, at 433,394 to 433,822
_00754
BACOVA_00755: BACOVA_00755 - tRNA-Gly, at 433,960 to 434,032
_00755
BACOVA_00756: BACOVA_00756 - hypothetical protein, at 434,421 to 434,555
_00756
BACOVA_00757: BACOVA_00757 - outer membrane efflux protein, at 434,809 to 436,221
_00757
Position (kb) 433
434
435 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 433.335 kb on + strand, within BACOVA_00753 at 433.335 kb on + strand, within BACOVA_00753 at 433.336 kb on - strand, within BACOVA_00753 at 433.337 kb on + strand, within BACOVA_00753 at 433.340 kb on + strand, within BACOVA_00753 at 433.340 kb on + strand, within BACOVA_00753 at 433.341 kb on - strand, within BACOVA_00753 at 433.341 kb on - strand, within BACOVA_00753 at 433.341 kb on - strand, within BACOVA_00753 at 433.345 kb on - strand, within BACOVA_00753 at 433.345 kb on - strand, within BACOVA_00753 at 433.345 kb on - strand, within BACOVA_00753 at 433.367 kb on + strand, within BACOVA_00753 at 433.385 kb on + strand, within BACOVA_00753 at 433.450 kb on + strand, within BACOVA_00754 at 433.461 kb on + strand, within BACOVA_00754 at 433.462 kb on - strand, within BACOVA_00754 at 433.613 kb on - strand, within BACOVA_00754 at 433.615 kb on + strand, within BACOVA_00754 at 433.640 kb on - strand, within BACOVA_00754 at 433.684 kb on - strand, within BACOVA_00754 at 433.739 kb on - strand, within BACOVA_00754 at 433.760 kb on - strand, within BACOVA_00754 at 433.801 kb on - strand at 433.816 kb on + strand at 433.823 kb on - strand at 433.863 kb on + strand at 433.864 kb on - strand at 433.880 kb on + strand at 433.884 kb on + strand at 433.885 kb on - strand at 434.025 kb on - strand at 434.038 kb on + strand at 434.039 kb on - strand at 434.086 kb on - strand at 434.098 kb on + strand at 434.100 kb on + strand at 434.209 kb on - strand at 434.212 kb on - strand at 434.220 kb on + strand at 434.294 kb on - strand at 434.300 kb on + strand at 434.312 kb on + strand at 434.423 kb on - strand at 434.448 kb on + strand, within BACOVA_00756 at 434.455 kb on + strand, within BACOVA_00756 at 434.456 kb on - strand, within BACOVA_00756 at 434.510 kb on + strand, within BACOVA_00756 at 434.557 kb on + strand at 434.557 kb on + strand at 434.558 kb on - strand at 434.559 kb on + strand at 434.581 kb on + strand at 434.590 kb on + strand at 434.594 kb on - strand at 434.611 kb on + strand at 434.612 kb on - strand at 434.649 kb on - strand at 434.657 kb on + strand at 434.658 kb on - strand at 434.729 kb on + strand at 434.730 kb on - strand at 434.730 kb on - strand at 434.736 kb on - strand at 434.796 kb on + strand at 434.796 kb on + strand at 434.809 kb on - strand at 434.832 kb on + strand at 434.834 kb on + strand at 434.834 kb on + strand at 434.837 kb on + strand at 434.838 kb on - strand at 434.838 kb on - strand at 434.868 kb on - strand at 434.879 kb on + strand at 434.879 kb on + strand at 434.880 kb on - strand at 434.886 kb on - strand at 434.886 kb on - strand at 434.946 kb on + strand at 434.946 kb on - strand at 434.947 kb on - strand at 434.980 kb on - strand, within BACOVA_00757 at 434.999 kb on - strand, within BACOVA_00757 at 435.003 kb on + strand, within BACOVA_00757 at 435.016 kb on - strand, within BACOVA_00757
Per-strain Table
Position Strand Gene LocusTag Fraction B-glucan from yeast 2.5 mg/mL (C) remove 433,335 + BACOVA_00753 0.37 +0.0 433,335 + BACOVA_00753 0.37 -0.5 433,336 - BACOVA_00753 0.38 -2.8 433,337 + BACOVA_00753 0.39 +0.1 433,340 + BACOVA_00753 0.42 -0.4 433,340 + BACOVA_00753 0.42 -1.5 433,341 - BACOVA_00753 0.43 +0.8 433,341 - BACOVA_00753 0.43 -0.6 433,341 - BACOVA_00753 0.43 -0.4 433,345 - BACOVA_00753 0.47 -0.7 433,345 - BACOVA_00753 0.47 +0.1 433,345 - BACOVA_00753 0.47 +0.4 433,367 + BACOVA_00753 0.68 +0.8 433,385 + BACOVA_00753 0.85 -0.0 433,450 + BACOVA_00754 0.13 -0.3 433,461 + BACOVA_00754 0.16 -2.0 433,462 - BACOVA_00754 0.16 +0.9 433,613 - BACOVA_00754 0.51 -0.2 433,615 + BACOVA_00754 0.52 +0.5 433,640 - BACOVA_00754 0.57 +0.9 433,684 - BACOVA_00754 0.68 +0.6 433,739 - BACOVA_00754 0.80 +0.5 433,760 - BACOVA_00754 0.85 +1.0 433,801 - -0.0 433,816 + -0.1 433,823 - -1.0 433,863 + -0.2 433,864 - -1.6 433,880 + +0.4 433,884 + -0.5 433,885 - -0.3 434,025 - -0.1 434,038 + -0.8 434,039 - +0.4 434,086 - -0.2 434,098 + -0.5 434,100 + +1.1 434,209 - +1.4 434,212 - -0.4 434,220 + -0.5 434,294 - +1.3 434,300 + +0.2 434,312 + +0.2 434,423 - +1.6 434,448 + BACOVA_00756 0.20 -0.8 434,455 + BACOVA_00756 0.25 +0.4 434,456 - BACOVA_00756 0.26 -1.5 434,510 + BACOVA_00756 0.66 -1.3 434,557 + +0.3 434,557 + -0.5 434,558 - +1.2 434,559 + -0.7 434,581 + -0.7 434,590 + +0.6 434,594 - -0.5 434,611 + +0.1 434,612 - -1.7 434,649 - -1.1 434,657 + -2.1 434,658 - -0.4 434,729 + +0.2 434,730 - +1.6 434,730 - +0.0 434,736 - +1.0 434,796 + -1.7 434,796 + -2.4 434,809 - +0.4 434,832 + +0.5 434,834 + -0.6 434,834 + -1.0 434,837 + -1.5 434,838 - +0.5 434,838 - +0.0 434,868 - +0.4 434,879 + +0.2 434,879 + -0.7 434,880 - +0.3 434,886 - -0.1 434,886 - +0.7 434,946 + +0.1 434,946 - +1.9 434,947 - -1.4 434,980 - BACOVA_00757 0.12 -0.1 434,999 - BACOVA_00757 0.13 +0.1 435,003 + BACOVA_00757 0.14 +0.5 435,016 - BACOVA_00757 0.15 -0.5
Or see this region's nucleotide sequence