Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03153

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03152 and MPMX26_03153 are separated by 171 nucleotidesMPMX26_03153 and MPMX26_03154 are separated by 119 nucleotidesMPMX26_03154 and MPMX26_03155 are separated by 1 nucleotidesMPMX26_03155 and MPMX26_03156 are separated by 2 nucleotides MPMX26_03152: MPMX26_03152 - IS6 family transposase IS1006, at 10,527 to 11,231 _03152 MPMX26_03153: MPMX26_03153 - Biofilm growth-associated repressor, at 11,403 to 11,714 _03153 MPMX26_03154: MPMX26_03154 - hypothetical protein, at 11,834 to 12,250 _03154 MPMX26_03155: MPMX26_03155 - hypothetical protein, at 12,252 to 12,668 _03155 MPMX26_03156: MPMX26_03156 - putative metallo-hydrolase, at 12,671 to 13,543 _03156 Position (kb) 11 12Strain fitness (log2 ratio) -2 -1 0 1 2at 10.412 kb on - strandat 10.478 kb on - strandat 10.789 kb on + strand, within MPMX26_03152at 10.789 kb on + strand, within MPMX26_03152at 10.794 kb on + strand, within MPMX26_03152at 10.943 kb on + strand, within MPMX26_03152at 10.986 kb on + strand, within MPMX26_03152at 11.047 kb on - strand, within MPMX26_03152at 11.049 kb on + strand, within MPMX26_03152at 11.085 kb on - strand, within MPMX26_03152at 11.257 kb on + strandat 11.408 kb on - strandat 11.408 kb on - strandat 11.413 kb on - strandat 11.415 kb on + strandat 11.421 kb on - strandat 11.421 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.423 kb on - strandat 11.431 kb on + strandat 11.450 kb on - strand, within MPMX26_03153at 11.450 kb on - strand, within MPMX26_03153at 11.488 kb on - strand, within MPMX26_03153at 11.493 kb on - strand, within MPMX26_03153at 11.514 kb on - strand, within MPMX26_03153at 11.514 kb on - strand, within MPMX26_03153at 11.522 kb on + strand, within MPMX26_03153at 11.530 kb on - strand, within MPMX26_03153at 11.530 kb on - strand, within MPMX26_03153at 11.530 kb on - strand, within MPMX26_03153at 11.597 kb on - strand, within MPMX26_03153at 11.636 kb on - strand, within MPMX26_03153at 11.640 kb on - strand, within MPMX26_03153at 11.834 kb on + strandat 11.834 kb on + strandat 11.891 kb on + strand, within MPMX26_03154at 11.891 kb on + strand, within MPMX26_03154at 11.903 kb on + strand, within MPMX26_03154at 11.945 kb on + strand, within MPMX26_03154at 11.965 kb on + strand, within MPMX26_03154at 11.965 kb on + strand, within MPMX26_03154at 11.975 kb on + strand, within MPMX26_03154at 12.028 kb on + strand, within MPMX26_03154at 12.037 kb on + strand, within MPMX26_03154at 12.059 kb on + strand, within MPMX26_03154at 12.083 kb on + strand, within MPMX26_03154at 12.113 kb on + strand, within MPMX26_03154at 12.113 kb on + strand, within MPMX26_03154at 12.113 kb on + strand, within MPMX26_03154at 12.213 kb on + strandat 12.282 kb on + strandat 12.282 kb on + strandat 12.287 kb on + strandat 12.287 kb on + strandat 12.287 kb on + strandat 12.287 kb on + strandat 12.287 kb on + strandat 12.287 kb on + strandat 12.287 kb on + strandat 12.287 kb on + strandat 12.292 kb on + strandat 12.292 kb on + strandat 12.292 kb on + strandat 12.294 kb on + strand, within MPMX26_03155at 12.294 kb on + strand, within MPMX26_03155at 12.299 kb on + strand, within MPMX26_03155at 12.306 kb on + strand, within MPMX26_03155at 12.372 kb on + strand, within MPMX26_03155at 12.372 kb on + strand, within MPMX26_03155at 12.372 kb on + strand, within MPMX26_03155at 12.372 kb on + strand, within MPMX26_03155at 12.372 kb on + strand, within MPMX26_03155at 12.384 kb on + strand, within MPMX26_03155at 12.384 kb on + strand, within MPMX26_03155at 12.384 kb on + strand, within MPMX26_03155at 12.410 kb on + strand, within MPMX26_03155at 12.429 kb on + strand, within MPMX26_03155at 12.429 kb on + strand, within MPMX26_03155at 12.509 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.537 kb on + strand, within MPMX26_03155at 12.549 kb on + strand, within MPMX26_03155at 12.571 kb on + strand, within MPMX26_03155at 12.571 kb on + strand, within MPMX26_03155at 12.576 kb on + strand, within MPMX26_03155at 12.586 kb on + strand, within MPMX26_03155at 12.586 kb on + strand, within MPMX26_03155at 12.586 kb on + strand, within MPMX26_03155at 12.586 kb on + strand, within MPMX26_03155at 12.586 kb on + strand, within MPMX26_03155at 12.586 kb on + strand, within MPMX26_03155at 12.593 kb on + strand, within MPMX26_03155at 12.595 kb on + strand, within MPMX26_03155at 12.596 kb on + strand, within MPMX26_03155at 12.605 kb on + strand, within MPMX26_03155at 12.626 kb on + strand, within MPMX26_03155at 12.629 kb on + strandat 12.656 kb on + strandat 12.656 kb on + strandat 12.710 kb on + strandat 12.710 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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10,412 - +1.2
10,478 - +0.8
10,789 + MPMX26_03152 0.37 +0.8
10,789 + MPMX26_03152 0.37 +0.2
10,794 + MPMX26_03152 0.38 -0.2
10,943 + MPMX26_03152 0.59 -0.4
10,986 + MPMX26_03152 0.65 +0.3
11,047 - MPMX26_03152 0.74 +1.0
11,049 + MPMX26_03152 0.74 +0.2
11,085 - MPMX26_03152 0.79 -0.8
11,257 + +0.1
11,408 - -1.2
11,408 - +0.6
11,413 - -0.4
11,415 + +1.2
11,421 - +0.9
11,421 - +0.7
11,423 - +2.1
11,423 - +1.3
11,423 - +2.3
11,423 - +0.7
11,423 - +1.4
11,423 - +1.6
11,423 - +2.0
11,423 - +1.2
11,423 - +0.4
11,423 - +0.4
11,423 - +2.2
11,423 - -0.1
11,423 - +0.6
11,423 - +0.4
11,431 + +0.3
11,450 - MPMX26_03153 0.15 -1.1
11,450 - MPMX26_03153 0.15 -0.9
11,488 - MPMX26_03153 0.27 +0.3
11,493 - MPMX26_03153 0.29 +0.6
11,514 - MPMX26_03153 0.36 -0.2
11,514 - MPMX26_03153 0.36 +1.4
11,522 + MPMX26_03153 0.38 +0.7
11,530 - MPMX26_03153 0.41 +0.3
11,530 - MPMX26_03153 0.41 -0.1
11,530 - MPMX26_03153 0.41 +2.0
11,597 - MPMX26_03153 0.62 +0.1
11,636 - MPMX26_03153 0.75 +0.2
11,640 - MPMX26_03153 0.76 -0.8
11,834 + +0.1
11,834 + -0.8
11,891 + MPMX26_03154 0.14 +0.4
11,891 + MPMX26_03154 0.14 -0.4
11,903 + MPMX26_03154 0.17 +1.2
11,945 + MPMX26_03154 0.27 -0.1
11,965 + MPMX26_03154 0.31 -0.6
11,965 + MPMX26_03154 0.31 +0.5
11,975 + MPMX26_03154 0.34 +1.2
12,028 + MPMX26_03154 0.47 +0.2
12,037 + MPMX26_03154 0.49 -0.8
12,059 + MPMX26_03154 0.54 -0.5
12,083 + MPMX26_03154 0.60 +1.0
12,113 + MPMX26_03154 0.67 +1.0
12,113 + MPMX26_03154 0.67 -1.4
12,113 + MPMX26_03154 0.67 -0.9
12,213 + +0.2
12,282 + +0.3
12,282 + +1.6
12,287 + -0.0
12,287 + -0.4
12,287 + -0.2
12,287 + +1.2
12,287 + -2.3
12,287 + -0.6
12,287 + +0.4
12,287 + +1.7
12,292 + +0.7
12,292 + -1.8
12,292 + +0.6
12,294 + MPMX26_03155 0.10 +0.1
12,294 + MPMX26_03155 0.10 -0.0
12,299 + MPMX26_03155 0.11 -1.3
12,306 + MPMX26_03155 0.13 -0.6
12,372 + MPMX26_03155 0.29 -0.6
12,372 + MPMX26_03155 0.29 +0.8
12,372 + MPMX26_03155 0.29 +0.0
12,372 + MPMX26_03155 0.29 +1.4
12,372 + MPMX26_03155 0.29 -1.5
12,384 + MPMX26_03155 0.32 -1.3
12,384 + MPMX26_03155 0.32 +2.3
12,384 + MPMX26_03155 0.32 +0.2
12,410 + MPMX26_03155 0.38 +0.5
12,429 + MPMX26_03155 0.42 -2.3
12,429 + MPMX26_03155 0.42 +0.0
12,509 + MPMX26_03155 0.62 -0.7
12,537 + MPMX26_03155 0.68 -0.3
12,537 + MPMX26_03155 0.68 -0.8
12,537 + MPMX26_03155 0.68 +0.4
12,537 + MPMX26_03155 0.68 +0.1
12,537 + MPMX26_03155 0.68 +0.6
12,537 + MPMX26_03155 0.68 +2.4
12,537 + MPMX26_03155 0.68 -0.4
12,537 + MPMX26_03155 0.68 +1.8
12,537 + MPMX26_03155 0.68 -0.0
12,537 + MPMX26_03155 0.68 +0.6
12,537 + MPMX26_03155 0.68 -0.4
12,537 + MPMX26_03155 0.68 +0.6
12,537 + MPMX26_03155 0.68 +0.3
12,549 + MPMX26_03155 0.71 +0.8
12,571 + MPMX26_03155 0.76 +0.6
12,571 + MPMX26_03155 0.76 +1.4
12,576 + MPMX26_03155 0.78 +1.2
12,586 + MPMX26_03155 0.80 +0.6
12,586 + MPMX26_03155 0.80 -0.0
12,586 + MPMX26_03155 0.80 +0.2
12,586 + MPMX26_03155 0.80 +0.3
12,586 + MPMX26_03155 0.80 -1.1
12,586 + MPMX26_03155 0.80 +2.1
12,593 + MPMX26_03155 0.82 -0.2
12,595 + MPMX26_03155 0.82 +0.2
12,596 + MPMX26_03155 0.82 -0.3
12,605 + MPMX26_03155 0.85 -1.4
12,626 + MPMX26_03155 0.90 -1.3
12,629 + +0.3
12,656 + -1.4
12,656 + -0.4
12,710 + -0.5
12,710 + +0.8

Or see this region's nucleotide sequence