Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03147 and MPMX26_03148 are separated by 215 nucleotides MPMX26_03148 and MPMX26_03149 are separated by 232 nucleotides MPMX26_03149 and MPMX26_03150 are separated by 454 nucleotides
MPMX26_03147: MPMX26_03147 - hypothetical protein, at 4,516 to 5,115
_03147
MPMX26_03148: MPMX26_03148 - hypothetical protein, at 5,331 to 5,741
_03148
MPMX26_03149: MPMX26_03149 - hypothetical protein, at 5,974 to 6,504
_03149
MPMX26_03150: MPMX26_03150 - ATP-dependent RecD-like DNA helicase, at 6,959 to 9,877
_03150
Position (kb) 5
6
7 Strain fitness (log2 ratio) -1
0
1
2 at 5.137 kb on + strand at 5.142 kb on + strand at 5.142 kb on + strand at 5.230 kb on + strand at 5.230 kb on + strand at 5.230 kb on + strand at 5.231 kb on + strand at 5.370 kb on + strand at 5.375 kb on + strand, within MPMX26_03148 at 5.430 kb on + strand, within MPMX26_03148 at 5.600 kb on + strand, within MPMX26_03148 at 5.623 kb on + strand, within MPMX26_03148 at 5.743 kb on + strand at 5.992 kb on - strand at 6.125 kb on - strand, within MPMX26_03149 at 6.508 kb on - strand at 6.992 kb on + strand at 7.020 kb on + strand at 7.027 kb on + strand at 7.052 kb on + strand at 7.052 kb on + strand at 7.168 kb on + strand at 7.168 kb on + strand at 7.214 kb on + strand at 7.276 kb on + strand, within MPMX26_03150 at 7.362 kb on + strand, within MPMX26_03150 at 7.377 kb on + strand, within MPMX26_03150 at 7.379 kb on + strand, within MPMX26_03150 at 7.400 kb on + strand, within MPMX26_03150 at 7.430 kb on + strand, within MPMX26_03150 at 7.430 kb on + strand, within MPMX26_03150 at 7.430 kb on + strand, within MPMX26_03150 at 7.469 kb on + strand, within MPMX26_03150
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 5,137 + +2.2 5,142 + +1.2 5,142 + +2.2 5,230 + +0.1 5,230 + +1.5 5,230 + -1.2 5,231 + +1.1 5,370 + +1.5 5,375 + MPMX26_03148 0.11 +1.8 5,430 + MPMX26_03148 0.24 +0.4 5,600 + MPMX26_03148 0.65 -0.2 5,623 + MPMX26_03148 0.71 +1.8 5,743 + +0.2 5,992 - +2.3 6,125 - MPMX26_03149 0.28 -0.5 6,508 - +0.2 6,992 + -0.5 7,020 + -0.9 7,027 + -0.4 7,052 + +0.0 7,052 + +0.1 7,168 + +0.3 7,168 + -0.2 7,214 + -0.3 7,276 + MPMX26_03150 0.11 +0.4 7,362 + MPMX26_03150 0.14 -0.0 7,377 + MPMX26_03150 0.14 +0.3 7,379 + MPMX26_03150 0.14 +2.2 7,400 + MPMX26_03150 0.15 -1.1 7,430 + MPMX26_03150 0.16 -0.4 7,430 + MPMX26_03150 0.16 +1.2 7,430 + MPMX26_03150 0.16 +0.5 7,469 + MPMX26_03150 0.17 +0.7
Or see this region's nucleotide sequence