Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02881

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02879 and MPMX26_02880 are separated by 27 nucleotidesMPMX26_02880 and MPMX26_02881 overlap by 11 nucleotidesMPMX26_02881 and MPMX26_02882 are separated by 428 nucleotides MPMX26_02879: MPMX26_02879 - tRNA-Thr, at 2,978,857 to 2,978,932 _02879 MPMX26_02880: MPMX26_02880 - hypothetical protein, at 2,978,960 to 2,979,814 _02880 MPMX26_02881: MPMX26_02881 - hypothetical protein, at 2,979,804 to 2,981,102 _02881 MPMX26_02882: MPMX26_02882 - hypothetical protein, at 2,981,531 to 2,982,949 _02882 Position (kb) 2979 2980 2981 2982Strain fitness (log2 ratio) -1 0 1 2at 2978.843 kb on + strandat 2978.850 kb on + strandat 2978.901 kb on + strand, within MPMX26_02879at 2978.909 kb on + strand, within MPMX26_02879at 2978.909 kb on + strand, within MPMX26_02879at 2978.909 kb on + strand, within MPMX26_02879at 2978.909 kb on + strand, within MPMX26_02879at 2978.981 kb on + strandat 2978.981 kb on + strandat 2978.981 kb on + strandat 2978.981 kb on + strandat 2978.981 kb on + strandat 2978.981 kb on + strandat 2978.981 kb on + strandat 2978.981 kb on + strandat 2978.981 kb on + strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2978.989 kb on - strandat 2979.009 kb on + strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.017 kb on - strandat 2979.082 kb on - strand, within MPMX26_02880at 2979.087 kb on - strand, within MPMX26_02880at 2979.087 kb on - strand, within MPMX26_02880at 2979.087 kb on - strand, within MPMX26_02880at 2979.087 kb on - strand, within MPMX26_02880at 2979.087 kb on - strand, within MPMX26_02880at 2979.239 kb on - strand, within MPMX26_02880at 2979.239 kb on - strand, within MPMX26_02880at 2979.350 kb on - strand, within MPMX26_02880at 2979.377 kb on - strand, within MPMX26_02880at 2979.490 kb on - strand, within MPMX26_02880at 2979.541 kb on - strand, within MPMX26_02880at 2979.558 kb on - strand, within MPMX26_02880at 2979.595 kb on - strand, within MPMX26_02880at 2979.595 kb on - strand, within MPMX26_02880at 2979.601 kb on - strand, within MPMX26_02880at 2979.601 kb on - strand, within MPMX26_02880at 2979.613 kb on - strand, within MPMX26_02880at 2979.613 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.620 kb on - strand, within MPMX26_02880at 2979.622 kb on + strand, within MPMX26_02880at 2979.625 kb on - strand, within MPMX26_02880at 2979.630 kb on - strand, within MPMX26_02880at 2979.630 kb on - strand, within MPMX26_02880at 2979.639 kb on - strand, within MPMX26_02880at 2979.689 kb on - strand, within MPMX26_02880at 2979.689 kb on - strand, within MPMX26_02880at 2979.693 kb on - strand, within MPMX26_02880at 2979.710 kb on - strand, within MPMX26_02880at 2979.710 kb on - strand, within MPMX26_02880at 2979.710 kb on - strand, within MPMX26_02880at 2979.715 kb on - strand, within MPMX26_02880at 2979.715 kb on - strand, within MPMX26_02880at 2979.720 kb on - strand, within MPMX26_02880at 2979.733 kb on - strandat 2979.736 kb on - strandat 2979.736 kb on - strandat 2979.758 kb on - strandat 2979.770 kb on - strandat 2980.417 kb on - strand, within MPMX26_02881at 2981.845 kb on - strand, within MPMX26_02882at 2981.963 kb on - strand, within MPMX26_02882at 2981.966 kb on - strand, within MPMX26_02882

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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2,978,843 + +0.4
2,978,850 + -0.2
2,978,901 + MPMX26_02879 0.58 +0.0
2,978,909 + MPMX26_02879 0.68 +0.0
2,978,909 + MPMX26_02879 0.68 +0.5
2,978,909 + MPMX26_02879 0.68 -0.2
2,978,909 + MPMX26_02879 0.68 +0.1
2,978,981 + +0.1
2,978,981 + -0.1
2,978,981 + -0.7
2,978,981 + +0.3
2,978,981 + -0.8
2,978,981 + +1.3
2,978,981 + +0.2
2,978,981 + -1.3
2,978,981 + +2.0
2,978,989 - +0.4
2,978,989 - -0.2
2,978,989 - +0.6
2,978,989 - -1.4
2,978,989 - +0.2
2,978,989 - -0.4
2,978,989 - -0.7
2,978,989 - +1.5
2,978,989 - +0.3
2,978,989 - -0.3
2,978,989 - +1.4
2,978,989 - +0.2
2,978,989 - -0.3
2,978,989 - +0.2
2,978,989 - +0.2
2,978,989 - -0.4
2,978,989 - -0.2
2,978,989 - +1.2
2,979,009 + -0.0
2,979,017 - +0.1
2,979,017 - +0.3
2,979,017 - +0.2
2,979,017 - -0.4
2,979,017 - +0.2
2,979,017 - -1.0
2,979,017 - +0.4
2,979,017 - +0.0
2,979,017 - +0.0
2,979,017 - +0.4
2,979,017 - -0.4
2,979,017 - -0.2
2,979,017 - +0.8
2,979,017 - -0.5
2,979,017 - +0.1
2,979,017 - -1.0
2,979,017 - -1.1
2,979,017 - +0.7
2,979,082 - MPMX26_02880 0.14 -1.1
2,979,087 - MPMX26_02880 0.15 -1.2
2,979,087 - MPMX26_02880 0.15 +0.6
2,979,087 - MPMX26_02880 0.15 -0.8
2,979,087 - MPMX26_02880 0.15 +0.3
2,979,087 - MPMX26_02880 0.15 -0.3
2,979,239 - MPMX26_02880 0.33 +0.1
2,979,239 - MPMX26_02880 0.33 +0.0
2,979,350 - MPMX26_02880 0.46 +0.1
2,979,377 - MPMX26_02880 0.49 +0.8
2,979,490 - MPMX26_02880 0.62 -0.4
2,979,541 - MPMX26_02880 0.68 -0.5
2,979,558 - MPMX26_02880 0.70 +0.6
2,979,595 - MPMX26_02880 0.74 -0.9
2,979,595 - MPMX26_02880 0.74 +0.3
2,979,601 - MPMX26_02880 0.75 -0.6
2,979,601 - MPMX26_02880 0.75 -0.2
2,979,613 - MPMX26_02880 0.76 -0.2
2,979,613 - MPMX26_02880 0.76 +0.7
2,979,620 - MPMX26_02880 0.77 +0.3
2,979,620 - MPMX26_02880 0.77 +0.1
2,979,620 - MPMX26_02880 0.77 -0.2
2,979,620 - MPMX26_02880 0.77 +0.8
2,979,620 - MPMX26_02880 0.77 +0.0
2,979,620 - MPMX26_02880 0.77 -0.2
2,979,620 - MPMX26_02880 0.77 -0.2
2,979,620 - MPMX26_02880 0.77 -0.0
2,979,620 - MPMX26_02880 0.77 +0.4
2,979,620 - MPMX26_02880 0.77 -0.1
2,979,622 + MPMX26_02880 0.77 +0.2
2,979,625 - MPMX26_02880 0.78 +0.1
2,979,630 - MPMX26_02880 0.78 -0.5
2,979,630 - MPMX26_02880 0.78 +0.5
2,979,639 - MPMX26_02880 0.79 +0.1
2,979,689 - MPMX26_02880 0.85 -0.1
2,979,689 - MPMX26_02880 0.85 +0.2
2,979,693 - MPMX26_02880 0.86 -0.6
2,979,710 - MPMX26_02880 0.88 -0.3
2,979,710 - MPMX26_02880 0.88 -1.3
2,979,710 - MPMX26_02880 0.88 -0.1
2,979,715 - MPMX26_02880 0.88 -0.2
2,979,715 - MPMX26_02880 0.88 +0.0
2,979,720 - MPMX26_02880 0.89 +0.1
2,979,733 - +0.3
2,979,736 - +0.0
2,979,736 - -0.0
2,979,758 - -0.2
2,979,770 - +0.7
2,980,417 - MPMX26_02881 0.47 -0.7
2,981,845 - MPMX26_02882 0.22 +1.2
2,981,963 - MPMX26_02882 0.30 +0.3
2,981,966 - MPMX26_02882 0.31 +0.9

Or see this region's nucleotide sequence