Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02388

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02387 and MPMX26_02388 are separated by 871 nucleotidesMPMX26_02388 and MPMX26_02389 are separated by 170 nucleotides MPMX26_02387: MPMX26_02387 - Thioredoxin reductase, at 2,470,260 to 2,471,147 _02387 MPMX26_02388: MPMX26_02388 - hypothetical protein, at 2,472,019 to 2,472,720 _02388 MPMX26_02389: MPMX26_02389 - hypothetical protein, at 2,472,891 to 2,473,796 _02389 Position (kb) 2472 2473Strain fitness (log2 ratio) -1 0 1at 2472.043 kb on + strandat 2472.043 kb on + strandat 2472.045 kb on + strandat 2472.050 kb on + strandat 2472.069 kb on + strandat 2472.077 kb on + strandat 2472.077 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.079 kb on + strandat 2472.155 kb on + strand, within MPMX26_02388at 2472.217 kb on + strand, within MPMX26_02388at 2472.397 kb on + strand, within MPMX26_02388

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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2,472,043 + +0.8
2,472,043 + -0.4
2,472,045 + +0.4
2,472,050 + +0.7
2,472,069 + +0.0
2,472,077 + -0.4
2,472,077 + -0.0
2,472,079 + +0.2
2,472,079 + +0.2
2,472,079 + -1.2
2,472,079 + +0.9
2,472,079 + -0.4
2,472,079 + +0.2
2,472,079 + +0.1
2,472,079 + -0.1
2,472,079 + -1.0
2,472,079 + -0.4
2,472,079 + -0.3
2,472,079 + +0.2
2,472,079 + -1.3
2,472,079 + -0.3
2,472,155 + MPMX26_02388 0.19 +1.6
2,472,217 + MPMX26_02388 0.28 -0.4
2,472,397 + MPMX26_02388 0.54 -1.3

Or see this region's nucleotide sequence