Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02347

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02345 and MPMX26_02346 are separated by 158 nucleotidesMPMX26_02346 and MPMX26_02347 are separated by 166 nucleotidesMPMX26_02347 and MPMX26_02348 overlap by 4 nucleotides MPMX26_02345: MPMX26_02345 - Fe/S biogenesis protein NfuA, at 2,421,965 to 2,422,603 _02345 MPMX26_02346: MPMX26_02346 - Rhomboid protease GlpG, at 2,422,762 to 2,423,382 _02346 MPMX26_02347: MPMX26_02347 - Arylsulfatase, at 2,423,549 to 2,425,210 _02347 MPMX26_02348: MPMX26_02348 - Formylglycine-generating enzyme, at 2,425,207 to 2,426,190 _02348 Position (kb) 2423 2424 2425 2426Strain fitness (log2 ratio) -1 0 1 2at 2422.888 kb on + strand, within MPMX26_02346at 2422.888 kb on + strand, within MPMX26_02346at 2423.014 kb on + strand, within MPMX26_02346at 2423.031 kb on + strand, within MPMX26_02346at 2423.031 kb on + strand, within MPMX26_02346at 2423.044 kb on + strand, within MPMX26_02346at 2423.044 kb on + strand, within MPMX26_02346at 2423.134 kb on + strand, within MPMX26_02346at 2423.148 kb on + strand, within MPMX26_02346at 2423.148 kb on + strand, within MPMX26_02346at 2423.148 kb on + strand, within MPMX26_02346at 2423.215 kb on + strand, within MPMX26_02346at 2423.215 kb on + strand, within MPMX26_02346at 2423.259 kb on + strand, within MPMX26_02346at 2423.296 kb on + strand, within MPMX26_02346at 2423.305 kb on + strand, within MPMX26_02346at 2423.332 kb on + strandat 2423.332 kb on + strandat 2423.338 kb on + strandat 2423.365 kb on + strandat 2424.257 kb on + strand, within MPMX26_02347at 2424.406 kb on - strand, within MPMX26_02347at 2425.664 kb on - strand, within MPMX26_02348

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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2,422,888 + MPMX26_02346 0.20 +0.1
2,422,888 + MPMX26_02346 0.20 -0.0
2,423,014 + MPMX26_02346 0.41 +0.1
2,423,031 + MPMX26_02346 0.43 +0.7
2,423,031 + MPMX26_02346 0.43 -0.6
2,423,044 + MPMX26_02346 0.45 +0.1
2,423,044 + MPMX26_02346 0.45 +0.8
2,423,134 + MPMX26_02346 0.60 -1.3
2,423,148 + MPMX26_02346 0.62 +0.1
2,423,148 + MPMX26_02346 0.62 -0.8
2,423,148 + MPMX26_02346 0.62 -0.1
2,423,215 + MPMX26_02346 0.73 +1.0
2,423,215 + MPMX26_02346 0.73 +1.1
2,423,259 + MPMX26_02346 0.80 +1.1
2,423,296 + MPMX26_02346 0.86 +0.7
2,423,305 + MPMX26_02346 0.87 +0.7
2,423,332 + -0.7
2,423,332 + +0.8
2,423,338 + -0.0
2,423,365 + +0.7
2,424,257 + MPMX26_02347 0.43 +2.6
2,424,406 - MPMX26_02347 0.52 +0.9
2,425,664 - MPMX26_02348 0.46 +0.4

Or see this region's nucleotide sequence