Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01899

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01898 and MPMX26_01899 are separated by 2 nucleotidesMPMX26_01899 and MPMX26_01900 are separated by 10 nucleotides MPMX26_01898: MPMX26_01898 - Anthranilate 1,2-dioxygenase large subunit, at 1,939,735 to 1,941,150 _01898 MPMX26_01899: MPMX26_01899 - Anthranilate 1,2-dioxygenase small subunit, at 1,941,153 to 1,941,644 _01899 MPMX26_01900: MPMX26_01900 - Anthranilate 1,2-dioxygenase electron transfer component, at 1,941,655 to 1,942,689 _01900 Position (kb) 1941 1942Strain fitness (log2 ratio) -1 0 1 2at 1940.232 kb on - strand, within MPMX26_01898at 1941.288 kb on - strand, within MPMX26_01899at 1941.410 kb on + strand, within MPMX26_01899at 1942.225 kb on + strand, within MPMX26_01900

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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1,940,232 - MPMX26_01898 0.35 +1.4
1,941,288 - MPMX26_01899 0.27 +1.4
1,941,410 + MPMX26_01899 0.52 +1.1
1,942,225 + MPMX26_01900 0.55 +2.1

Or see this region's nucleotide sequence