Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01851 and MPMX26_01852 are separated by 50 nucleotides MPMX26_01852 and MPMX26_01853 are separated by 481 nucleotides
MPMX26_01851: MPMX26_01851 - putative transcriptional regulatory protein YebC, at 1,888,554 to 1,889,303
_01851
MPMX26_01852: MPMX26_01852 - DNA-binding transcriptional activator DecR, at 1,889,354 to 1,889,836
_01852
MPMX26_01853: MPMX26_01853 - hypothetical protein, at 1,890,318 to 1,891,082
_01853
Position (kb)
1889
1890 Strain fitness (log2 ratio)
-2
-1
0
1 at 1888.563 kb on + strand at 1888.579 kb on + strand at 1888.579 kb on + strand at 1888.691 kb on + strand, within MPMX26_01851 at 1888.817 kb on + strand, within MPMX26_01851 at 1888.833 kb on + strand, within MPMX26_01851 at 1888.866 kb on + strand, within MPMX26_01851 at 1888.881 kb on + strand, within MPMX26_01851 at 1888.881 kb on + strand, within MPMX26_01851 at 1889.061 kb on + strand, within MPMX26_01851 at 1889.097 kb on + strand, within MPMX26_01851 at 1889.137 kb on + strand, within MPMX26_01851 at 1889.137 kb on + strand, within MPMX26_01851 at 1889.137 kb on + strand, within MPMX26_01851 at 1889.145 kb on + strand, within MPMX26_01851 at 1889.145 kb on + strand, within MPMX26_01851 at 1889.145 kb on + strand, within MPMX26_01851 at 1889.229 kb on + strand at 1889.229 kb on + strand at 1889.241 kb on + strand at 1889.250 kb on + strand at 1889.275 kb on + strand at 1889.280 kb on + strand at 1889.293 kb on - strand at 1889.371 kb on - strand at 1889.619 kb on - strand, within MPMX26_01852 at 1889.621 kb on - strand, within MPMX26_01852 at 1889.631 kb on - strand, within MPMX26_01852 at 1889.693 kb on - strand, within MPMX26_01852 at 1889.737 kb on - strand, within MPMX26_01852 at 1889.739 kb on - strand, within MPMX26_01852 at 1889.833 kb on - strand at 1889.979 kb on - strand at 1889.979 kb on - strand at 1890.049 kb on - strand at 1890.066 kb on - strand at 1890.087 kb on - strand at 1890.107 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 1,888,563 + +0.4 1,888,579 + -0.9 1,888,579 + -1.2 1,888,691 + MPMX26_01851 0.18 -0.0 1,888,817 + MPMX26_01851 0.35 +0.3 1,888,833 + MPMX26_01851 0.37 +0.8 1,888,866 + MPMX26_01851 0.42 -0.1 1,888,881 + MPMX26_01851 0.44 +0.2 1,888,881 + MPMX26_01851 0.44 -0.2 1,889,061 + MPMX26_01851 0.68 +0.2 1,889,097 + MPMX26_01851 0.72 -0.1 1,889,137 + MPMX26_01851 0.78 +0.0 1,889,137 + MPMX26_01851 0.78 -0.2 1,889,137 + MPMX26_01851 0.78 -0.1 1,889,145 + MPMX26_01851 0.79 +0.4 1,889,145 + MPMX26_01851 0.79 +0.2 1,889,145 + MPMX26_01851 0.79 +0.1 1,889,229 + +0.3 1,889,229 + -0.2 1,889,241 + +0.2 1,889,250 + -0.9 1,889,275 + +0.6 1,889,280 + -0.9 1,889,293 - -0.9 1,889,371 - -0.1 1,889,619 - MPMX26_01852 0.55 +0.2 1,889,621 - MPMX26_01852 0.55 -0.6 1,889,631 - MPMX26_01852 0.57 -0.1 1,889,693 - MPMX26_01852 0.70 -0.3 1,889,737 - MPMX26_01852 0.79 -0.0 1,889,739 - MPMX26_01852 0.80 -0.9 1,889,833 - +0.8 1,889,979 - +0.1 1,889,979 - -0.1 1,890,049 - +0.8 1,890,066 - -2.2 1,890,087 - -0.4 1,890,107 - -0.0
Or see this region's nucleotide sequence