Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00825

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00824 and MPMX26_00825 are separated by 152 nucleotidesMPMX26_00825 and MPMX26_00826 are separated by 122 nucleotides MPMX26_00824: MPMX26_00824 - hypothetical protein, at 869,877 to 870,920 _00824 MPMX26_00825: MPMX26_00825 - hypothetical protein, at 871,073 to 872,116 _00825 MPMX26_00826: MPMX26_00826 - hypothetical protein, at 872,239 to 873,171 _00826 Position (kb) 871 872 873Strain fitness (log2 ratio) -1 0 1at 870.193 kb on - strand, within MPMX26_00824at 870.856 kb on + strandat 871.744 kb on + strand, within MPMX26_00825at 871.818 kb on + strand, within MPMX26_00825at 872.878 kb on - strand, within MPMX26_00826

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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870,193 - MPMX26_00824 0.30 -0.2
870,856 + +0.2
871,744 + MPMX26_00825 0.64 +0.7
871,818 + MPMX26_00825 0.71 +0.2
872,878 - MPMX26_00826 0.68 +0.6

Or see this region's nucleotide sequence