Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00309 and MPMX26_00310 are separated by 346 nucleotides MPMX26_00310 and MPMX26_00311 are separated by 93 nucleotides MPMX26_00311 and MPMX26_00312 are separated by 60 nucleotides MPMX26_00312 and MPMX26_00313 are separated by 19 nucleotides MPMX26_00313 and MPMX26_00314 are separated by 132 nucleotides
MPMX26_00309: MPMX26_00309 - Threonine efflux protein, at 337,650 to 338,270
_00309
MPMX26_00310: MPMX26_00310 - hypothetical protein, at 338,617 to 339,147
_00310
MPMX26_00311: MPMX26_00311 - tRNA-Lys, at 339,241 to 339,316
_00311
MPMX26_00312: MPMX26_00312 - tRNA-Lys, at 339,377 to 339,452
_00312
MPMX26_00313: MPMX26_00313 - tRNA-Lys, at 339,472 to 339,547
_00313
MPMX26_00314: MPMX26_00314 - Crotonobetaine/carnitine--CoA ligase, at 339,680 to 341,521
_00314
Position (kb) 338
339
340 Strain fitness (log2 ratio) -1
0
1
2
3 at 337.638 kb on + strand at 337.645 kb on + strand at 337.692 kb on + strand at 337.692 kb on + strand at 337.697 kb on + strand at 337.697 kb on + strand at 337.697 kb on + strand at 337.697 kb on + strand at 337.697 kb on + strand at 337.697 kb on + strand at 337.762 kb on + strand, within MPMX26_00309 at 337.770 kb on + strand, within MPMX26_00309 at 337.786 kb on + strand, within MPMX26_00309 at 337.786 kb on + strand, within MPMX26_00309 at 337.786 kb on + strand, within MPMX26_00309 at 337.786 kb on + strand, within MPMX26_00309 at 337.786 kb on + strand, within MPMX26_00309 at 337.786 kb on + strand, within MPMX26_00309 at 337.786 kb on + strand, within MPMX26_00309 at 337.794 kb on + strand, within MPMX26_00309 at 337.794 kb on + strand, within MPMX26_00309 at 337.794 kb on + strand, within MPMX26_00309 at 337.794 kb on + strand, within MPMX26_00309 at 337.809 kb on + strand, within MPMX26_00309 at 337.809 kb on + strand, within MPMX26_00309 at 337.809 kb on + strand, within MPMX26_00309 at 337.809 kb on + strand, within MPMX26_00309 at 337.946 kb on + strand, within MPMX26_00309 at 337.971 kb on + strand, within MPMX26_00309 at 338.018 kb on + strand, within MPMX26_00309 at 338.069 kb on + strand, within MPMX26_00309 at 338.079 kb on + strand, within MPMX26_00309 at 338.079 kb on + strand, within MPMX26_00309 at 338.079 kb on + strand, within MPMX26_00309 at 338.094 kb on + strand, within MPMX26_00309 at 338.114 kb on + strand, within MPMX26_00309 at 338.120 kb on + strand, within MPMX26_00309 at 338.162 kb on + strand, within MPMX26_00309 at 338.168 kb on + strand, within MPMX26_00309 at 338.183 kb on + strand, within MPMX26_00309 at 338.199 kb on + strand, within MPMX26_00309 at 338.217 kb on + strand at 338.287 kb on + strand at 338.316 kb on + strand at 338.316 kb on + strand at 338.318 kb on + strand at 338.318 kb on + strand at 338.318 kb on + strand at 338.326 kb on + strand at 338.326 kb on + strand at 338.326 kb on + strand at 338.721 kb on + strand, within MPMX26_00310 at 338.731 kb on + strand, within MPMX26_00310 at 338.914 kb on + strand, within MPMX26_00310 at 339.069 kb on + strand, within MPMX26_00310 at 339.069 kb on + strand, within MPMX26_00310 at 339.085 kb on + strand, within MPMX26_00310 at 339.090 kb on + strand, within MPMX26_00310 at 339.285 kb on - strand, within MPMX26_00311 at 339.285 kb on - strand, within MPMX26_00311 at 339.299 kb on - strand, within MPMX26_00311 at 339.300 kb on - strand, within MPMX26_00311 at 339.300 kb on - strand, within MPMX26_00311 at 339.300 kb on - strand, within MPMX26_00311 at 339.300 kb on - strand, within MPMX26_00311 at 339.300 kb on - strand, within MPMX26_00311 at 339.312 kb on - strand at 339.334 kb on - strand at 339.460 kb on - strand at 339.706 kb on - strand at 339.708 kb on - strand at 339.880 kb on - strand, within MPMX26_00314 at 339.880 kb on - strand, within MPMX26_00314 at 339.880 kb on - strand, within MPMX26_00314 at 339.932 kb on - strand, within MPMX26_00314 at 339.936 kb on - strand, within MPMX26_00314 at 339.937 kb on - strand, within MPMX26_00314 at 339.965 kb on - strand, within MPMX26_00314 at 340.021 kb on - strand, within MPMX26_00314 at 340.021 kb on - strand, within MPMX26_00314 at 340.147 kb on - strand, within MPMX26_00314
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 337,638 + +1.2 337,645 + -0.0 337,692 + +0.6 337,692 + -0.0 337,697 + -0.5 337,697 + +0.4 337,697 + -0.2 337,697 + +0.1 337,697 + +0.5 337,697 + -0.1 337,762 + MPMX26_00309 0.18 -0.4 337,770 + MPMX26_00309 0.19 -0.5 337,786 + MPMX26_00309 0.22 -0.2 337,786 + MPMX26_00309 0.22 +0.6 337,786 + MPMX26_00309 0.22 +0.5 337,786 + MPMX26_00309 0.22 +0.9 337,786 + MPMX26_00309 0.22 -0.0 337,786 + MPMX26_00309 0.22 +0.6 337,786 + MPMX26_00309 0.22 -0.1 337,794 + MPMX26_00309 0.23 +0.2 337,794 + MPMX26_00309 0.23 +0.3 337,794 + MPMX26_00309 0.23 -0.0 337,794 + MPMX26_00309 0.23 -0.8 337,809 + MPMX26_00309 0.26 +0.0 337,809 + MPMX26_00309 0.26 -0.6 337,809 + MPMX26_00309 0.26 +0.1 337,809 + MPMX26_00309 0.26 -0.4 337,946 + MPMX26_00309 0.48 -0.2 337,971 + MPMX26_00309 0.52 +0.3 338,018 + MPMX26_00309 0.59 -0.5 338,069 + MPMX26_00309 0.67 +0.3 338,079 + MPMX26_00309 0.69 -0.5 338,079 + MPMX26_00309 0.69 -0.5 338,079 + MPMX26_00309 0.69 -1.3 338,094 + MPMX26_00309 0.71 -1.1 338,114 + MPMX26_00309 0.75 +0.1 338,120 + MPMX26_00309 0.76 -0.6 338,162 + MPMX26_00309 0.82 -1.0 338,168 + MPMX26_00309 0.83 -0.5 338,183 + MPMX26_00309 0.86 -0.4 338,199 + MPMX26_00309 0.88 +0.7 338,217 + +0.1 338,287 + -1.7 338,316 + +1.4 338,316 + +0.3 338,318 + -0.0 338,318 + +0.8 338,318 + +1.6 338,326 + +0.5 338,326 + +0.1 338,326 + -0.5 338,721 + MPMX26_00310 0.20 -0.2 338,731 + MPMX26_00310 0.21 +0.1 338,914 + MPMX26_00310 0.56 -0.1 339,069 + MPMX26_00310 0.85 -1.0 339,069 + MPMX26_00310 0.85 -0.6 339,085 + MPMX26_00310 0.88 +1.3 339,090 + MPMX26_00310 0.89 -0.2 339,285 - MPMX26_00311 0.58 -0.1 339,285 - MPMX26_00311 0.58 -0.9 339,299 - MPMX26_00311 0.76 +0.3 339,300 - MPMX26_00311 0.78 -0.4 339,300 - MPMX26_00311 0.78 -0.6 339,300 - MPMX26_00311 0.78 +1.0 339,300 - MPMX26_00311 0.78 -1.2 339,300 - MPMX26_00311 0.78 -0.0 339,312 - +0.1 339,334 - -0.0 339,460 - +2.8 339,706 - -0.6 339,708 - -0.3 339,880 - MPMX26_00314 0.11 -0.2 339,880 - MPMX26_00314 0.11 -0.5 339,880 - MPMX26_00314 0.11 -0.1 339,932 - MPMX26_00314 0.14 -0.4 339,936 - MPMX26_00314 0.14 +0.2 339,937 - MPMX26_00314 0.14 -0.6 339,965 - MPMX26_00314 0.15 -0.1 340,021 - MPMX26_00314 0.19 +0.8 340,021 - MPMX26_00314 0.19 +0.5 340,147 - MPMX26_00314 0.25 +0.6
Or see this region's nucleotide sequence