Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF988

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
727,233	-		GFF987	0.56	-0.5
727,233	-		GFF987	0.56	-0.2
727,264	+		GFF987	0.58	+0.6
727,265	-		GFF987	0.58	-0.0
727,399	+		GFF987	0.64	+0.8
727,812	-		GFF987	0.85	+0.2
727,940	-				-1.3
727,986	-				-1.1
728,000	+				+0.9
728,000	+				+0.0
728,133	-				-0.2
728,271	-		GFF988	0.13	+0.3
728,281	-		GFF988	0.14	+0.9
728,285	+		GFF988	0.15	+1.0
728,825	+		GFF988	0.62	+0.1
728,866	-		GFF988	0.65	+0.3
728,918	+		GFF988	0.70	+0.3
728,919	-		GFF988	0.70	+0.4
729,122	+		GFF988	0.88	+0.5
729,122	+		GFF988	0.88	-1.8
729,123	-		GFF988	0.88	+0.1
729,365	-				+1.0
729,647	-		GFF989	0.36	+0.1
729,726	+		GFF989	0.44	-0.5
730,142	-		GFF989	0.83	-0.0
730,172	-		GFF989	0.85	+0.4