Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF807

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
502,217	+		GFF806	0.66	+0.5
502,217	+		GFF806	0.66	-1.1
502,289	+		GFF806	0.72	-1.4
502,289	+		GFF806	0.72	+0.2
502,289	+		GFF806	0.72	+0.0
502,290	-		GFF806	0.72	+0.0
502,671	+				-0.2
502,672	-				+0.2
502,672	-				+0.0
502,672	-				+0.1
502,672	-				-0.1
502,790	+				+0.0
502,790	+				-0.2
502,791	-				-0.1
502,791	-				-0.1
502,791	-				+1.2
502,818	-				+0.7
502,818	-				-1.8
502,818	-				+0.4
502,829	+				-0.4
502,970	+				-1.7
503,223	+		GFF807	0.28	-1.2
503,392	-		GFF807	0.44	+1.5
503,392	-		GFF807	0.44	-0.0
503,392	-		GFF807	0.44	+0.1
503,541	+		GFF807	0.57	+0.8
503,788	-		GFF807	0.80	+1.0
503,788	-		GFF807	0.80	-0.1
503,919	+				+0.5
504,132	-		GFF808	0.29	+0.2
504,248	+		GFF808	0.59	+0.7
504,248	+		GFF808	0.59	+0.1
504,248	+		GFF808	0.59	-1.2
504,248	+		GFF808	0.59	+0.0
504,248	+		GFF808	0.59	-0.3
504,248	+		GFF808	0.59	-0.1
504,249	-		GFF808	0.60	-1.4
504,249	-		GFF808	0.60	-0.6
504,557	-		GFF809	0.21	-0.0
504,871	+		GFF809	0.65	+0.7
504,871	+		GFF809	0.65	+0.0
504,871	+		GFF809	0.65	-0.4
504,892	+		GFF809	0.68	+0.5
504,892	+		GFF809	0.68	-0.3
504,893	-		GFF809	0.68	-0.1
504,893	-		GFF809	0.68	-0.7
504,893	-		GFF809	0.68	-0.7
505,000	+		GFF809	0.83	+0.3
505,000	+		GFF809	0.83	-0.2
505,001	-		GFF809	0.84	-0.2
505,001	-		GFF809	0.84	-0.2
505,001	-		GFF809	0.84	-0.4
505,001	-		GFF809	0.84	-1.0