Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5361

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,363,221	+				+1.5
2,363,221	+				+1.7
2,363,222	-				-0.1
2,363,222	-				-0.3
2,363,338	-				-0.8
2,363,338	-				-0.7
2,364,456	-		GFF5361	0.47	-0.1
2,364,456	-		GFF5361	0.47	+0.9
2,364,530	+		GFF5361	0.51	+1.5
2,364,531	-		GFF5361	0.51	+1.0
2,364,537	+		GFF5361	0.51	-0.1
2,364,538	-		GFF5361	0.51	-1.8
2,364,538	-		GFF5361	0.51	-1.3
2,364,538	-		GFF5361	0.51	+0.2
2,364,538	-		GFF5361	0.51	+0.0
2,364,538	-		GFF5361	0.51	-0.6
2,364,538	-		GFF5361	0.51	+0.4
2,365,307	+		GFF5361	0.89	-0.3
2,365,308	-		GFF5361	0.89	+0.0
2,365,308	-		GFF5361	0.89	-0.1
2,365,308	-		GFF5361	0.89	-0.1
2,365,424	+				+0.1
2,365,424	+				+0.7
2,365,604	+				+0.0
2,365,607	+				+0.1
2,365,607	+				+0.4
2,365,607	+				-0.3
2,365,607	+				+0.3
2,365,608	-				+0.1
2,365,608	-				+0.6
2,365,608	-				+0.5
2,365,608	-				-0.3
2,365,744	-		GFF5362	0.33	-0.1
2,365,744	-		GFF5362	0.33	-0.2
2,365,744	-		GFF5362	0.33	-0.2
2,365,744	-		GFF5362	0.33	+0.4
2,365,744	-		GFF5362	0.33	-0.2
2,365,923	-		GFF5362	0.80	+1.3
2,365,995	-				+0.1
2,366,428	-		GFF5363	0.21	+0.4