Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5073

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,087,301	-				-0.3
2,087,301	-				+0.3
2,087,301	-				-0.3
2,087,575	-		GFF5072	0.26	+0.5
2,087,575	-		GFF5072	0.26	+0.6
2,088,536	+		GFF5073	0.35	-0.2
2,088,537	-		GFF5073	0.35	-0.6
2,088,800	+		GFF5073	0.65	+0.3
2,088,821	+		GFF5073	0.67	-0.0
2,088,821	+		GFF5073	0.67	+0.7
2,088,822	-		GFF5073	0.67	+1.2
2,088,822	-		GFF5073	0.67	+0.4
2,088,962	+		GFF5073	0.83	-0.1
2,088,962	+		GFF5073	0.83	-0.5
2,088,962	+		GFF5073	0.83	+0.3
2,088,963	-		GFF5073	0.83	+0.7
2,089,424	-		GFF5074	0.21	+0.9
2,090,087	-		GFF5074	0.64	+0.0