Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5066

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,082,581	+				+0.1
2,082,819	-		GFF5066	0.26	+0.6
2,082,901	+		GFF5066	0.40	-0.6
2,082,902	-		GFF5066	0.40	+1.3
2,082,902	-		GFF5066	0.40	-1.4
2,083,030	+		GFF5066	0.60	+0.3
2,083,030	+		GFF5066	0.60	-0.3
2,083,031	-		GFF5066	0.61	+0.6
2,083,031	-		GFF5066	0.61	+0.7
2,083,147	+		GFF5066	0.79	-0.3
2,083,148	-		GFF5066	0.79	+0.3
2,083,286	+				+0.0
2,083,287	-				+0.6
2,083,532	+		GFF5067	0.38	+0.3
2,083,532	+		GFF5067	0.38	-0.2
2,083,532	+		GFF5067	0.38	+0.1
2,083,532	+		GFF5067	0.38	-0.5
2,083,532	+		GFF5067	0.38	-0.3
2,083,733	+		GFF5067	0.69	+0.3
2,084,009	+		GFF5068	0.10	+0.5
2,084,171	-		GFF5068	0.29	-1.9