Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4686

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
1,636,692	+				+0.4
1,636,693	-				+0.4
1,636,765	-		GFF4685	0.16	-0.8
1,636,765	-		GFF4685	0.16	+0.3
1,636,765	-		GFF4685	0.16	+0.3
1,636,906	-		GFF4685	0.33	-1.2
1,637,895	-		GFF4686	0.80	+0.4
1,637,928	-		GFF4686	0.86	+0.4
1,638,008	+				-0.5
1,638,008	+				-1.4
1,638,008	+				+0.3
1,638,008	+				-0.3
1,638,008	+				+0.5
1,638,009	-				+0.3
1,638,098	-				-0.2
1,638,277	+		GFF4687	0.23	-0.2
1,638,659	-		GFF4687	0.54	+1.1
1,638,659	-		GFF4687	0.54	+1.1
1,638,659	-		GFF4687	0.54	-0.5
1,638,922	+		GFF4687	0.76	+0.7
1,638,961	+		GFF4687	0.79	-0.5
1,638,961	+		GFF4687	0.79	-2.8
1,638,962	-		GFF4687	0.79	+0.2
1,638,962	-		GFF4687	0.79	-1.0
1,638,962	-		GFF4687	0.79	+0.1