Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4669

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
1,618,566	-		GFF4668	0.55	-0.0
1,618,898	+		GFF4668	0.77	+0.1
1,618,899	-		GFF4668	0.77	+0.3
1,618,946	+		GFF4668	0.81	+0.8
1,618,946	+		GFF4668	0.81	-0.1
1,618,946	+		GFF4668	0.81	+0.4
1,619,007	-		GFF4668	0.85	-0.1
1,619,007	-		GFF4668	0.85	-0.9
1,619,081	+		GFF4668	0.89	-1.3
1,619,081	+		GFF4668	0.89	-0.7
1,619,081	+		GFF4668	0.89	-0.0
1,619,081	+		GFF4668	0.89	+0.3
1,619,082	-		GFF4668	0.90	-0.2
1,619,082	-		GFF4668	0.90	-0.2
1,619,344	-				+0.1
1,619,344	-				+0.0
1,619,364	+				+0.2
1,619,364	+				+0.0
1,619,364	+				-0.3
1,619,364	+				-0.2
1,619,365	-				-0.4
1,619,414	+				-0.6
1,619,415	-				-0.2
1,619,841	+		GFF4669	0.55	+1.2
1,619,841	+		GFF4669	0.55	+1.0
1,619,841	+		GFF4669	0.55	+1.6
1,619,841	+		GFF4669	0.55	+0.7
1,619,841	+		GFF4669	0.55	+1.1
1,619,841	+		GFF4669	0.55	+1.2
1,619,841	+		GFF4669	0.55	+1.3
1,619,841	+		GFF4669	0.55	-0.1
1,619,842	-		GFF4669	0.56	+0.5
1,619,842	-		GFF4669	0.56	+1.0
1,619,842	-		GFF4669	0.56	-0.3
1,619,842	-		GFF4669	0.56	+0.9
1,619,842	-		GFF4669	0.56	+1.0
1,619,890	-		GFF4669	0.61	+0.9
1,619,979	+		GFF4669	0.72	+0.8
1,619,979	+		GFF4669	0.72	+1.1
1,619,979	+		GFF4669	0.72	+1.0
1,619,980	-		GFF4669	0.72	+1.0
1,619,980	-		GFF4669	0.72	+1.6
1,619,980	-		GFF4669	0.72	+0.9
1,620,189	+				+0.4
1,620,189	+				+0.8
1,620,190	-				+0.8
1,620,248	-				-0.4
1,620,321	+		GFF4670	0.13	+1.0
1,620,322	-		GFF4670	0.13	+1.5
1,620,411	+		GFF4670	0.27	+0.8
1,620,411	+		GFF4670	0.27	+1.0
1,620,412	-		GFF4670	0.27	-0.3
1,620,414	+		GFF4670	0.27	+0.8
1,620,414	+		GFF4670	0.27	+0.7
1,620,414	+		GFF4670	0.27	+1.2
1,620,414	+		GFF4670	0.27	+0.7
1,620,414	+		GFF4670	0.27	+0.5
1,620,414	+		GFF4670	0.27	+0.6
1,620,414	+		GFF4670	0.27	+1.0
1,620,414	+		GFF4670	0.27	+0.8
1,620,415	-		GFF4670	0.27	+1.3
1,620,415	-		GFF4670	0.27	+1.8
1,620,415	-		GFF4670	0.27	+1.4
1,620,415	-		GFF4670	0.27	+0.9
1,620,415	-		GFF4670	0.27	+1.7
1,620,777	+		GFF4670	0.81	+0.5
1,620,777	+		GFF4670	0.81	+1.3
1,620,777	+		GFF4670	0.81	+1.8
1,620,777	+		GFF4670	0.81	+0.5
1,620,778	-		GFF4670	0.81	+0.5
1,620,910	+				-0.1
1,620,910	+				-1.2
1,620,910	+				-0.7
1,620,910	+				+0.3
1,620,911	-				+1.0
1,620,911	-				+0.4
1,620,911	-				+0.5
1,620,911	-				+0.7