Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3625

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
511,046	+		GFF3624	0.27	+0.2
511,112	+		GFF3624	0.33	+0.0
511,112	+		GFF3624	0.33	-0.2
511,113	-		GFF3624	0.33	-1.1
511,250	+		GFF3624	0.48	+0.1
511,251	-		GFF3624	0.48	+0.7
511,338	-		GFF3624	0.57	+0.1
511,338	-		GFF3624	0.57	-0.3
511,542	-		GFF3624	0.78	+0.2
512,268	+		GFF3625	0.62	+0.0
512,412	+		GFF3625	0.81	+0.6
512,412	+		GFF3625	0.81	-0.8
512,412	+		GFF3625	0.81	+0.4
512,413	-		GFF3625	0.81	+0.8
512,508	+				-0.6
512,508	+				-0.8
512,720	+				+0.3
512,721	-				-0.0
512,784	-		GFF3626	0.13	-1.6