Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF218

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
239,210	+		GFF217	0.61	-0.5
239,591	+		GFF217	0.89	-0.2
239,591	+		GFF217	0.89	-0.7
239,591	+		GFF217	0.89	-0.4
239,591	+		GFF217	0.89	+1.2
239,592	-		GFF217	0.89	+0.8
239,592	-		GFF217	0.89	+0.4
239,592	-		GFF217	0.89	+0.2
239,595	-		GFF217	0.89	+0.3
239,595	-		GFF217	0.89	-0.1
240,121	+		GFF218	0.64	-0.4
240,122	-		GFF218	0.64	+0.1
240,274	+				+0.0
240,274	+				-0.5
240,274	+				-0.7
240,274	+				+0.0
240,274	+				+0.1
240,275	-				+0.4
240,389	+				+0.0
240,390	-				-0.2
240,390	-				-0.3
240,390	-				-0.6
240,390	-				-0.3
240,480	+				+0.4
240,480	+				+0.7
240,480	+				-2.1
240,480	+				+0.1
240,480	+				-1.1
240,481	-				-0.5
240,481	-				+0.4
240,481	-				+0.2
240,481	-				+0.9
241,110	+				+0.4