Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF150

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
165,169	+		GFF149	0.37	-0.2
165,169	+		GFF149	0.37	+0.2
165,206	-		GFF149	0.40	-0.3
165,673	+		GFF149	0.77	+1.0
165,674	-		GFF149	0.77	-0.4
165,674	-		GFF149	0.77	+0.6
165,674	-		GFF149	0.77	+0.5
165,865	+				-0.2
165,866	-				+0.1
165,866	-				-0.1
165,866	-				-0.2
165,961	+				-0.5
165,962	-				-0.1
165,962	-				-0.2
165,962	-				-0.1
166,024	+		GFF150	0.25	+0.2
166,111	+		GFF150	0.80	+1.2
166,111	+		GFF150	0.80	-0.1
166,495	+				+0.3
166,496	-				-0.1
166,496	-				+0.4
166,881	-				+0.3
166,884	-				+0.8