Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03751

Experiment: Mucin from porcine stomach type III 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03750 and BACOVA_03751 are separated by 55 nucleotidesBACOVA_03751 and BACOVA_03752 are separated by 8 nucleotides BACOVA_03750: BACOVA_03750 - phosphate-selective porin O and P, at 80,242 to 81,612 _03750 BACOVA_03751: BACOVA_03751 - hypothetical protein, at 81,668 to 81,775 _03751 BACOVA_03752: BACOVA_03752 - carbamoyl-phosphate synthase, large subunit, at 81,784 to 85,011 _03752 Position (kb) 81 82Strain fitness (log2 ratio) -3 -2 -1 0 1at 80.669 kb on + strand, within BACOVA_03750at 80.670 kb on - strand, within BACOVA_03750at 80.670 kb on - strand, within BACOVA_03750at 80.674 kb on - strand, within BACOVA_03750at 80.691 kb on + strand, within BACOVA_03750at 80.691 kb on + strand, within BACOVA_03750at 80.698 kb on - strand, within BACOVA_03750at 80.699 kb on + strand, within BACOVA_03750at 80.709 kb on - strand, within BACOVA_03750at 80.751 kb on + strand, within BACOVA_03750at 80.751 kb on + strand, within BACOVA_03750at 80.754 kb on + strand, within BACOVA_03750at 80.756 kb on + strand, within BACOVA_03750at 80.880 kb on + strand, within BACOVA_03750at 80.881 kb on - strand, within BACOVA_03750at 80.885 kb on + strand, within BACOVA_03750at 80.918 kb on + strand, within BACOVA_03750at 80.923 kb on - strand, within BACOVA_03750at 80.935 kb on + strand, within BACOVA_03750at 80.989 kb on - strand, within BACOVA_03750at 81.200 kb on + strand, within BACOVA_03750at 81.209 kb on + strand, within BACOVA_03750at 81.209 kb on + strand, within BACOVA_03750at 81.213 kb on + strand, within BACOVA_03750at 81.214 kb on - strand, within BACOVA_03750at 81.220 kb on + strand, within BACOVA_03750at 81.313 kb on - strand, within BACOVA_03750at 81.425 kb on + strand, within BACOVA_03750at 81.446 kb on - strand, within BACOVA_03750at 81.516 kb on + strandat 81.516 kb on + strandat 81.517 kb on - strandat 81.559 kb on + strandat 81.559 kb on + strandat 81.660 kb on - strandat 81.678 kb on + strandat 81.682 kb on - strand, within BACOVA_03751at 81.689 kb on + strand, within BACOVA_03751at 81.729 kb on + strand, within BACOVA_03751at 81.785 kb on + strandat 81.792 kb on - strandat 81.811 kb on - strandat 81.814 kb on + strandat 81.814 kb on + strandat 81.814 kb on + strandat 81.814 kb on + strandat 81.815 kb on - strandat 81.815 kb on - strandat 81.815 kb on - strandat 81.816 kb on + strandat 81.816 kb on + strandat 81.817 kb on - strandat 81.835 kb on - strandat 81.876 kb on + strandat 81.888 kb on + strandat 81.888 kb on + strandat 81.888 kb on + strandat 81.927 kb on + strandat 81.928 kb on - strandat 81.931 kb on + strandat 81.932 kb on - strandat 81.968 kb on - strandat 82.035 kb on - strandat 82.080 kb on + strandat 82.179 kb on + strand, within BACOVA_03752at 82.194 kb on + strand, within BACOVA_03752at 82.239 kb on + strand, within BACOVA_03752at 82.279 kb on - strand, within BACOVA_03752at 82.349 kb on + strand, within BACOVA_03752at 82.480 kb on - strand, within BACOVA_03752at 82.498 kb on - strand, within BACOVA_03752at 82.554 kb on + strand, within BACOVA_03752at 82.572 kb on + strand, within BACOVA_03752at 82.597 kb on + strand, within BACOVA_03752at 82.645 kb on + strand, within BACOVA_03752at 82.673 kb on - strand, within BACOVA_03752at 82.673 kb on - strand, within BACOVA_03752at 82.674 kb on + strand, within BACOVA_03752at 82.674 kb on + strand, within BACOVA_03752at 82.675 kb on - strand, within BACOVA_03752at 82.675 kb on - strand, within BACOVA_03752at 82.679 kb on + strand, within BACOVA_03752at 82.754 kb on - strand, within BACOVA_03752at 82.774 kb on + strand, within BACOVA_03752

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Per-strain Table

Position Strand Gene LocusTag Fraction Mucin from porcine stomach type III 2.5 mg/mL (C)
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80,669 + BACOVA_03750 0.31 -0.0
80,670 - BACOVA_03750 0.31 -0.2
80,670 - BACOVA_03750 0.31 +0.6
80,674 - BACOVA_03750 0.32 -0.1
80,691 + BACOVA_03750 0.33 +0.6
80,691 + BACOVA_03750 0.33 +0.3
80,698 - BACOVA_03750 0.33 -0.1
80,699 + BACOVA_03750 0.33 -0.9
80,709 - BACOVA_03750 0.34 -1.2
80,751 + BACOVA_03750 0.37 +0.3
80,751 + BACOVA_03750 0.37 -0.9
80,754 + BACOVA_03750 0.37 +1.0
80,756 + BACOVA_03750 0.37 -1.2
80,880 + BACOVA_03750 0.47 -1.5
80,881 - BACOVA_03750 0.47 -1.3
80,885 + BACOVA_03750 0.47 -0.5
80,918 + BACOVA_03750 0.49 +0.4
80,923 - BACOVA_03750 0.50 +0.9
80,935 + BACOVA_03750 0.51 +0.3
80,989 - BACOVA_03750 0.54 +0.4
81,200 + BACOVA_03750 0.70 -0.4
81,209 + BACOVA_03750 0.71 +0.0
81,209 + BACOVA_03750 0.71 +1.1
81,213 + BACOVA_03750 0.71 +1.1
81,214 - BACOVA_03750 0.71 -0.0
81,220 + BACOVA_03750 0.71 +0.1
81,313 - BACOVA_03750 0.78 +0.8
81,425 + BACOVA_03750 0.86 +0.3
81,446 - BACOVA_03750 0.88 -1.4
81,516 + +1.1
81,516 + -0.0
81,517 - +0.2
81,559 + -0.3
81,559 + -0.0
81,660 - -0.3
81,678 + +0.4
81,682 - BACOVA_03751 0.13 -0.8
81,689 + BACOVA_03751 0.19 -0.9
81,729 + BACOVA_03751 0.56 -2.0
81,785 + +1.1
81,792 - -0.1
81,811 - -3.3
81,814 + -1.0
81,814 + -0.4
81,814 + +0.5
81,814 + -0.2
81,815 - -0.0
81,815 - +0.1
81,815 - -0.2
81,816 + +1.0
81,816 + -0.1
81,817 - +0.5
81,835 - +0.4
81,876 + +0.4
81,888 + -0.5
81,888 + -0.6
81,888 + +0.9
81,927 + -1.0
81,928 - -0.5
81,931 + +0.3
81,932 - -0.2
81,968 - -0.5
82,035 - -0.3
82,080 + -1.5
82,179 + BACOVA_03752 0.12 -0.7
82,194 + BACOVA_03752 0.13 -0.1
82,239 + BACOVA_03752 0.14 +0.2
82,279 - BACOVA_03752 0.15 -0.7
82,349 + BACOVA_03752 0.18 +0.5
82,480 - BACOVA_03752 0.22 +0.1
82,498 - BACOVA_03752 0.22 +0.1
82,554 + BACOVA_03752 0.24 +0.4
82,572 + BACOVA_03752 0.24 -0.5
82,597 + BACOVA_03752 0.25 +0.2
82,645 + BACOVA_03752 0.27 +0.7
82,673 - BACOVA_03752 0.28 -0.2
82,673 - BACOVA_03752 0.28 -0.5
82,674 + BACOVA_03752 0.28 +0.8
82,674 + BACOVA_03752 0.28 +0.5
82,675 - BACOVA_03752 0.28 +0.5
82,675 - BACOVA_03752 0.28 -0.5
82,679 + BACOVA_03752 0.28 +0.3
82,754 - BACOVA_03752 0.30 -0.5
82,774 + BACOVA_03752 0.31 -1.2

Or see this region's nucleotide sequence