Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02148

Experiment: Mucin from porcine stomach type III 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02144 and BACOVA_02145 are separated by 15 nucleotidesBACOVA_02145 and BACOVA_02146 are separated by 51 nucleotidesBACOVA_02146 and BACOVA_02147 are separated by 40 nucleotidesBACOVA_02147 and BACOVA_02148 are separated by 37 nucleotidesBACOVA_02148 and BACOVA_02149 are separated by 88 nucleotidesBACOVA_02149 and BACOVA_02150 are separated by 83 nucleotides BACOVA_02144: BACOVA_02144 - hypothetical protein, at 485,816 to 486,022 _02144 BACOVA_02145: BACOVA_02145 - hypothetical protein, at 486,038 to 486,490 _02145 BACOVA_02146: BACOVA_02146 - hypothetical protein, at 486,542 to 486,700 _02146 BACOVA_02147: BACOVA_02147 - hypothetical protein, at 486,741 to 486,971 _02147 BACOVA_02148: BACOVA_02148 - hypothetical protein, at 487,009 to 487,191 _02148 BACOVA_02149: BACOVA_02149 - hypothetical protein, at 487,280 to 487,504 _02149 BACOVA_02150: BACOVA_02150 - hypothetical protein, at 487,588 to 487,863 _02150 Position (kb) 487 488Strain fitness (log2 ratio) -2 -1 0 1 2at 486.009 kb on + strandat 486.009 kb on + strandat 486.010 kb on - strandat 486.011 kb on + strandat 486.012 kb on - strandat 486.012 kb on - strandat 486.021 kb on - strandat 486.023 kb on + strandat 486.023 kb on + strandat 486.024 kb on - strandat 486.038 kb on - strandat 486.093 kb on + strand, within BACOVA_02145at 486.093 kb on + strand, within BACOVA_02145at 486.120 kb on + strand, within BACOVA_02145at 486.120 kb on + strand, within BACOVA_02145at 486.121 kb on - strand, within BACOVA_02145at 486.129 kb on + strand, within BACOVA_02145at 486.130 kb on - strand, within BACOVA_02145at 486.137 kb on + strand, within BACOVA_02145at 486.137 kb on + strand, within BACOVA_02145at 486.140 kb on - strand, within BACOVA_02145at 486.155 kb on + strand, within BACOVA_02145at 486.155 kb on + strand, within BACOVA_02145at 486.157 kb on + strand, within BACOVA_02145at 486.157 kb on + strand, within BACOVA_02145at 486.158 kb on - strand, within BACOVA_02145at 486.158 kb on - strand, within BACOVA_02145at 486.158 kb on - strand, within BACOVA_02145at 486.158 kb on - strand, within BACOVA_02145at 486.172 kb on + strand, within BACOVA_02145at 486.173 kb on - strand, within BACOVA_02145at 486.177 kb on + strand, within BACOVA_02145at 486.202 kb on + strand, within BACOVA_02145at 486.206 kb on + strand, within BACOVA_02145at 486.207 kb on - strand, within BACOVA_02145at 486.224 kb on - strand, within BACOVA_02145at 486.225 kb on + strand, within BACOVA_02145at 486.226 kb on - strand, within BACOVA_02145at 486.251 kb on + strand, within BACOVA_02145at 486.254 kb on - strand, within BACOVA_02145at 486.254 kb on - strand, within BACOVA_02145at 486.261 kb on + strand, within BACOVA_02145at 486.261 kb on + strand, within BACOVA_02145at 486.262 kb on - strand, within BACOVA_02145at 486.265 kb on - strand, within BACOVA_02145at 486.265 kb on - strand, within BACOVA_02145at 486.265 kb on - strand, within BACOVA_02145at 486.270 kb on - strand, within BACOVA_02145at 486.270 kb on - strand, within BACOVA_02145at 486.274 kb on + strand, within BACOVA_02145at 486.277 kb on + strand, within BACOVA_02145at 486.278 kb on - strand, within BACOVA_02145at 486.300 kb on + strand, within BACOVA_02145at 486.306 kb on + strand, within BACOVA_02145at 486.311 kb on - strand, within BACOVA_02145at 486.326 kb on - strand, within BACOVA_02145at 486.345 kb on + strand, within BACOVA_02145at 486.346 kb on - strand, within BACOVA_02145at 486.346 kb on - strand, within BACOVA_02145at 486.346 kb on - strand, within BACOVA_02145at 486.346 kb on - strand, within BACOVA_02145at 486.356 kb on - strand, within BACOVA_02145at 486.375 kb on + strand, within BACOVA_02145at 486.388 kb on - strand, within BACOVA_02145at 486.406 kb on + strand, within BACOVA_02145at 486.406 kb on + strand, within BACOVA_02145at 486.410 kb on - strand, within BACOVA_02145at 486.416 kb on + strand, within BACOVA_02145at 486.416 kb on + strand, within BACOVA_02145at 486.416 kb on + strand, within BACOVA_02145at 486.416 kb on + strand, within BACOVA_02145at 486.417 kb on - strand, within BACOVA_02145at 486.417 kb on - strand, within BACOVA_02145at 486.421 kb on + strand, within BACOVA_02145at 486.422 kb on - strand, within BACOVA_02145at 486.422 kb on - strand, within BACOVA_02145at 486.422 kb on - strand, within BACOVA_02145at 486.422 kb on - strand, within BACOVA_02145at 486.439 kb on + strand, within BACOVA_02145at 486.456 kb on - strandat 486.465 kb on + strandat 486.470 kb on - strandat 486.478 kb on + strandat 486.502 kb on - strandat 486.503 kb on + strandat 486.503 kb on + strandat 486.503 kb on + strandat 486.522 kb on + strandat 486.542 kb on - strandat 486.546 kb on + strandat 486.547 kb on - strandat 486.628 kb on + strand, within BACOVA_02146at 486.655 kb on + strand, within BACOVA_02146at 486.656 kb on - strand, within BACOVA_02146at 486.671 kb on - strand, within BACOVA_02146at 486.671 kb on - strand, within BACOVA_02146at 486.675 kb on + strand, within BACOVA_02146at 486.694 kb on - strandat 486.696 kb on + strandat 486.696 kb on + strandat 486.696 kb on + strandat 486.698 kb on + strandat 486.698 kb on + strandat 486.711 kb on + strandat 486.712 kb on - strandat 486.733 kb on + strandat 486.733 kb on + strandat 486.736 kb on + strandat 486.741 kb on - strandat 486.781 kb on + strand, within BACOVA_02147at 486.782 kb on - strand, within BACOVA_02147at 486.784 kb on + strand, within BACOVA_02147at 486.784 kb on + strand, within BACOVA_02147at 486.787 kb on + strand, within BACOVA_02147at 486.820 kb on + strand, within BACOVA_02147at 486.837 kb on - strand, within BACOVA_02147at 486.839 kb on + strand, within BACOVA_02147at 486.839 kb on + strand, within BACOVA_02147at 486.839 kb on + strand, within BACOVA_02147at 486.840 kb on - strand, within BACOVA_02147at 486.853 kb on + strand, within BACOVA_02147at 486.853 kb on + strand, within BACOVA_02147at 486.888 kb on - strand, within BACOVA_02147at 486.896 kb on + strand, within BACOVA_02147at 486.899 kb on - strand, within BACOVA_02147at 486.910 kb on + strand, within BACOVA_02147at 486.923 kb on - strand, within BACOVA_02147at 486.923 kb on - strand, within BACOVA_02147at 486.923 kb on - strand, within BACOVA_02147at 486.935 kb on - strand, within BACOVA_02147at 486.944 kb on + strand, within BACOVA_02147at 486.945 kb on - strand, within BACOVA_02147at 486.945 kb on - strand, within BACOVA_02147at 486.949 kb on + strandat 486.950 kb on - strandat 486.969 kb on + strandat 486.970 kb on - strandat 486.983 kb on + strandat 486.989 kb on - strandat 487.000 kb on - strandat 487.005 kb on - strandat 487.009 kb on - strandat 487.042 kb on - strand, within BACOVA_02148at 487.044 kb on + strand, within BACOVA_02148at 487.097 kb on + strand, within BACOVA_02148at 487.121 kb on + strand, within BACOVA_02148at 487.121 kb on + strand, within BACOVA_02148at 487.122 kb on - strand, within BACOVA_02148at 487.122 kb on - strand, within BACOVA_02148at 487.125 kb on + strand, within BACOVA_02148at 487.144 kb on - strand, within BACOVA_02148at 487.144 kb on - strand, within BACOVA_02148at 487.144 kb on - strand, within BACOVA_02148at 487.149 kb on - strand, within BACOVA_02148at 487.195 kb on + strandat 487.196 kb on - strandat 487.199 kb on - strandat 487.199 kb on - strandat 487.199 kb on - strandat 487.199 kb on - strandat 487.209 kb on + strandat 487.227 kb on + strandat 487.251 kb on - strandat 487.257 kb on - strandat 487.257 kb on - strandat 487.263 kb on - strandat 487.263 kb on - strandat 487.271 kb on + strandat 487.301 kb on + strandat 487.302 kb on - strandat 487.302 kb on - strandat 487.302 kb on - strandat 487.312 kb on - strand, within BACOVA_02149at 487.315 kb on - strand, within BACOVA_02149at 487.315 kb on - strand, within BACOVA_02149at 487.338 kb on + strand, within BACOVA_02149at 487.386 kb on + strand, within BACOVA_02149at 487.396 kb on + strand, within BACOVA_02149at 487.406 kb on - strand, within BACOVA_02149at 487.406 kb on - strand, within BACOVA_02149at 487.456 kb on + strand, within BACOVA_02149at 487.545 kb on + strandat 487.563 kb on + strandat 487.564 kb on - strandat 487.564 kb on - strandat 487.564 kb on - strandat 487.573 kb on + strandat 487.573 kb on + strandat 487.574 kb on - strandat 487.574 kb on - strandat 487.576 kb on + strandat 487.576 kb on + strandat 487.578 kb on + strandat 487.578 kb on + strandat 487.587 kb on + strandat 487.588 kb on - strandat 487.588 kb on - strandat 487.588 kb on - strandat 487.648 kb on + strand, within BACOVA_02150at 487.649 kb on - strand, within BACOVA_02150at 487.680 kb on - strand, within BACOVA_02150at 487.680 kb on - strand, within BACOVA_02150at 487.680 kb on - strand, within BACOVA_02150at 487.703 kb on + strand, within BACOVA_02150at 487.703 kb on + strand, within BACOVA_02150at 487.704 kb on - strand, within BACOVA_02150at 487.704 kb on - strand, within BACOVA_02150at 487.706 kb on - strand, within BACOVA_02150at 487.706 kb on - strand, within BACOVA_02150at 487.718 kb on + strand, within BACOVA_02150at 487.722 kb on + strand, within BACOVA_02150at 487.722 kb on + strand, within BACOVA_02150at 487.722 kb on + strand, within BACOVA_02150at 487.724 kb on + strand, within BACOVA_02150at 487.724 kb on + strand, within BACOVA_02150at 487.741 kb on + strand, within BACOVA_02150at 487.742 kb on - strand, within BACOVA_02150at 487.753 kb on - strand, within BACOVA_02150at 487.753 kb on - strand, within BACOVA_02150at 487.784 kb on + strand, within BACOVA_02150at 487.785 kb on - strand, within BACOVA_02150at 487.794 kb on + strand, within BACOVA_02150at 487.854 kb on + strandat 487.860 kb on - strandat 487.861 kb on + strandat 487.862 kb on - strandat 487.862 kb on - strandat 487.872 kb on + strandat 487.878 kb on + strandat 487.879 kb on - strandat 487.880 kb on + strandat 487.880 kb on + strandat 487.880 kb on + strandat 487.881 kb on - strandat 487.881 kb on - strandat 487.881 kb on - strandat 487.881 kb on - strandat 487.882 kb on + strandat 487.882 kb on + strandat 487.900 kb on + strandat 487.900 kb on + strandat 487.912 kb on + strandat 487.913 kb on - strandat 487.913 kb on - strandat 487.923 kb on - strandat 487.929 kb on - strandat 487.935 kb on + strandat 487.938 kb on + strandat 487.941 kb on + strandat 487.942 kb on - strandat 487.942 kb on - strandat 487.944 kb on + strandat 487.945 kb on - strandat 487.947 kb on + strandat 487.951 kb on + strandat 487.977 kb on - strandat 487.986 kb on + strandat 487.991 kb on + strandat 487.995 kb on + strandat 488.000 kb on + strandat 488.001 kb on - strandat 488.022 kb on - strandat 488.026 kb on - strandat 488.055 kb on - strandat 488.074 kb on + strandat 488.087 kb on - strandat 488.113 kb on - strandat 488.113 kb on - strandat 488.130 kb on - strandat 488.132 kb on - strandat 488.175 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mucin from porcine stomach type III 2.5 mg/mL (C)
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486,009 + -0.6
486,009 + +0.1
486,010 - -0.0
486,011 + +1.4
486,012 - +0.2
486,012 - +1.3
486,021 - +0.8
486,023 + +0.2
486,023 + -0.1
486,024 - +0.0
486,038 - +1.0
486,093 + BACOVA_02145 0.12 -0.0
486,093 + BACOVA_02145 0.12 -0.0
486,120 + BACOVA_02145 0.18 +0.1
486,120 + BACOVA_02145 0.18 -0.5
486,121 - BACOVA_02145 0.18 +0.8
486,129 + BACOVA_02145 0.20 +0.6
486,130 - BACOVA_02145 0.20 -2.2
486,137 + BACOVA_02145 0.22 -1.0
486,137 + BACOVA_02145 0.22 +0.7
486,140 - BACOVA_02145 0.23 +1.1
486,155 + BACOVA_02145 0.26 +0.4
486,155 + BACOVA_02145 0.26 -0.4
486,157 + BACOVA_02145 0.26 +2.1
486,157 + BACOVA_02145 0.26 -1.8
486,158 - BACOVA_02145 0.26 +0.7
486,158 - BACOVA_02145 0.26 +1.3
486,158 - BACOVA_02145 0.26 +0.1
486,158 - BACOVA_02145 0.26 -0.6
486,172 + BACOVA_02145 0.30 -0.5
486,173 - BACOVA_02145 0.30 -0.1
486,177 + BACOVA_02145 0.31 +0.5
486,202 + BACOVA_02145 0.36 +0.0
486,206 + BACOVA_02145 0.37 +0.0
486,207 - BACOVA_02145 0.37 -0.7
486,224 - BACOVA_02145 0.41 +2.0
486,225 + BACOVA_02145 0.41 +0.1
486,226 - BACOVA_02145 0.42 -2.4
486,251 + BACOVA_02145 0.47 -0.4
486,254 - BACOVA_02145 0.48 +1.3
486,254 - BACOVA_02145 0.48 -0.1
486,261 + BACOVA_02145 0.49 -0.7
486,261 + BACOVA_02145 0.49 -1.3
486,262 - BACOVA_02145 0.49 +1.0
486,265 - BACOVA_02145 0.50 +0.6
486,265 - BACOVA_02145 0.50 -0.1
486,265 - BACOVA_02145 0.50 +0.7
486,270 - BACOVA_02145 0.51 -1.3
486,270 - BACOVA_02145 0.51 -0.1
486,274 + BACOVA_02145 0.52 -0.6
486,277 + BACOVA_02145 0.53 +1.1
486,278 - BACOVA_02145 0.53 -1.0
486,300 + BACOVA_02145 0.58 -0.3
486,306 + BACOVA_02145 0.59 +0.5
486,311 - BACOVA_02145 0.60 +0.4
486,326 - BACOVA_02145 0.64 -0.4
486,345 + BACOVA_02145 0.68 +0.1
486,346 - BACOVA_02145 0.68 +0.3
486,346 - BACOVA_02145 0.68 +0.6
486,346 - BACOVA_02145 0.68 +0.4
486,346 - BACOVA_02145 0.68 +0.4
486,356 - BACOVA_02145 0.70 -0.2
486,375 + BACOVA_02145 0.74 -1.1
486,388 - BACOVA_02145 0.77 +0.4
486,406 + BACOVA_02145 0.81 +1.2
486,406 + BACOVA_02145 0.81 -0.4
486,410 - BACOVA_02145 0.82 -0.0
486,416 + BACOVA_02145 0.83 +0.3
486,416 + BACOVA_02145 0.83 +1.3
486,416 + BACOVA_02145 0.83 -0.3
486,416 + BACOVA_02145 0.83 -0.5
486,417 - BACOVA_02145 0.84 +0.1
486,417 - BACOVA_02145 0.84 -0.3
486,421 + BACOVA_02145 0.85 -0.2
486,422 - BACOVA_02145 0.85 +0.3
486,422 - BACOVA_02145 0.85 -0.9
486,422 - BACOVA_02145 0.85 +1.0
486,422 - BACOVA_02145 0.85 -0.1
486,439 + BACOVA_02145 0.89 -0.9
486,456 - -0.4
486,465 + +0.5
486,470 - +1.0
486,478 + -1.2
486,502 - -0.1
486,503 + -1.1
486,503 + +1.1
486,503 + -0.3
486,522 + +0.4
486,542 - -1.4
486,546 + +0.1
486,547 - -0.6
486,628 + BACOVA_02146 0.54 -1.6
486,655 + BACOVA_02146 0.71 -0.2
486,656 - BACOVA_02146 0.72 +0.4
486,671 - BACOVA_02146 0.81 +0.8
486,671 - BACOVA_02146 0.81 -0.0
486,675 + BACOVA_02146 0.84 -0.0
486,694 - +0.6
486,696 + -0.1
486,696 + -1.0
486,696 + -0.1
486,698 + +0.1
486,698 + +0.4
486,711 + -0.4
486,712 - +0.4
486,733 + +0.3
486,733 + -0.3
486,736 + -0.3
486,741 - +0.9
486,781 + BACOVA_02147 0.17 +0.9
486,782 - BACOVA_02147 0.18 +0.3
486,784 + BACOVA_02147 0.19 -0.7
486,784 + BACOVA_02147 0.19 -0.2
486,787 + BACOVA_02147 0.20 +0.7
486,820 + BACOVA_02147 0.34 -0.2
486,837 - BACOVA_02147 0.42 +0.7
486,839 + BACOVA_02147 0.42 -0.2
486,839 + BACOVA_02147 0.42 +0.1
486,839 + BACOVA_02147 0.42 +0.2
486,840 - BACOVA_02147 0.43 -0.6
486,853 + BACOVA_02147 0.48 -1.0
486,853 + BACOVA_02147 0.48 -0.6
486,888 - BACOVA_02147 0.64 -1.3
486,896 + BACOVA_02147 0.67 -0.2
486,899 - BACOVA_02147 0.68 +0.3
486,910 + BACOVA_02147 0.73 -0.5
486,923 - BACOVA_02147 0.79 -0.3
486,923 - BACOVA_02147 0.79 -0.0
486,923 - BACOVA_02147 0.79 +1.2
486,935 - BACOVA_02147 0.84 +0.3
486,944 + BACOVA_02147 0.88 -0.2
486,945 - BACOVA_02147 0.88 +0.2
486,945 - BACOVA_02147 0.88 +0.1
486,949 + +0.1
486,950 - +0.1
486,969 + -1.6
486,970 - -1.1
486,983 + -0.2
486,989 - -0.3
487,000 - +0.1
487,005 - -0.3
487,009 - +0.4
487,042 - BACOVA_02148 0.18 +0.7
487,044 + BACOVA_02148 0.19 +0.0
487,097 + BACOVA_02148 0.48 +0.6
487,121 + BACOVA_02148 0.61 +0.8
487,121 + BACOVA_02148 0.61 -1.2
487,122 - BACOVA_02148 0.62 -0.7
487,122 - BACOVA_02148 0.62 -0.4
487,125 + BACOVA_02148 0.63 -0.6
487,144 - BACOVA_02148 0.74 -0.4
487,144 - BACOVA_02148 0.74 +0.6
487,144 - BACOVA_02148 0.74 -0.7
487,149 - BACOVA_02148 0.77 -0.3
487,195 + -0.1
487,196 - -0.4
487,199 - +0.2
487,199 - +0.4
487,199 - +1.0
487,199 - -0.4
487,209 + +0.5
487,227 + -1.3
487,251 - +1.9
487,257 - +0.9
487,257 - +0.4
487,263 - -0.5
487,263 - -0.4
487,271 + -0.5
487,301 + +0.0
487,302 - +0.5
487,302 - +0.7
487,302 - +0.6
487,312 - BACOVA_02149 0.14 +0.3
487,315 - BACOVA_02149 0.16 +0.9
487,315 - BACOVA_02149 0.16 -0.0
487,338 + BACOVA_02149 0.26 +0.0
487,386 + BACOVA_02149 0.47 +1.0
487,396 + BACOVA_02149 0.52 -0.9
487,406 - BACOVA_02149 0.56 -1.6
487,406 - BACOVA_02149 0.56 +0.7
487,456 + BACOVA_02149 0.78 -0.6
487,545 + +0.0
487,563 + -1.0
487,564 - +0.0
487,564 - +0.2
487,564 - +0.6
487,573 + -0.6
487,573 + -0.8
487,574 - +1.1
487,574 - +1.0
487,576 + -0.4
487,576 + +0.4
487,578 + -0.3
487,578 + -0.6
487,587 + -0.5
487,588 - +1.5
487,588 - -0.4
487,588 - +0.2
487,648 + BACOVA_02150 0.22 -0.4
487,649 - BACOVA_02150 0.22 -0.3
487,680 - BACOVA_02150 0.33 +0.3
487,680 - BACOVA_02150 0.33 +0.1
487,680 - BACOVA_02150 0.33 -1.0
487,703 + BACOVA_02150 0.42 +0.0
487,703 + BACOVA_02150 0.42 +0.2
487,704 - BACOVA_02150 0.42 -1.8
487,704 - BACOVA_02150 0.42 -0.3
487,706 - BACOVA_02150 0.43 +0.8
487,706 - BACOVA_02150 0.43 -0.1
487,718 + BACOVA_02150 0.47 -0.6
487,722 + BACOVA_02150 0.49 +0.3
487,722 + BACOVA_02150 0.49 -0.8
487,722 + BACOVA_02150 0.49 +0.5
487,724 + BACOVA_02150 0.49 +0.8
487,724 + BACOVA_02150 0.49 +0.8
487,741 + BACOVA_02150 0.55 +0.7
487,742 - BACOVA_02150 0.56 -0.0
487,753 - BACOVA_02150 0.60 -0.4
487,753 - BACOVA_02150 0.60 +0.5
487,784 + BACOVA_02150 0.71 +0.8
487,785 - BACOVA_02150 0.71 -0.3
487,794 + BACOVA_02150 0.75 +0.9
487,854 + -0.3
487,860 - -0.0
487,861 + -0.2
487,862 - +0.2
487,862 - +1.4
487,872 + -0.5
487,878 + -0.3
487,879 - +0.4
487,880 + -1.3
487,880 + +1.6
487,880 + +0.8
487,881 - +0.1
487,881 - +0.4
487,881 - -0.0
487,881 - +0.3
487,882 + +0.1
487,882 + -0.3
487,900 + -1.0
487,900 + -0.9
487,912 + -0.3
487,913 - -0.3
487,913 - -0.7
487,923 - +0.2
487,929 - -0.2
487,935 + -0.3
487,938 + +1.1
487,941 + -0.8
487,942 - -0.1
487,942 - +0.4
487,944 + -0.7
487,945 - -0.1
487,947 + +1.2
487,951 + +0.4
487,977 - +0.0
487,986 + -0.9
487,991 + -1.0
487,995 + -1.2
488,000 + -0.4
488,001 - -0.6
488,022 - +0.1
488,026 - -1.1
488,055 - -0.6
488,074 + -1.1
488,087 - -0.4
488,113 - +0.8
488,113 - +0.5
488,130 - +0.1
488,132 - +0.5
488,175 + -0.1

Or see this region's nucleotide sequence