Experiment: FE-G2T (Control flower group 2, top)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04550 and OLJFJH_04555 are separated by 378 nucleotides OLJFJH_04555 and OLJFJH_04560 are separated by 83 nucleotides
OLJFJH_04550: OLJFJH_04550 - hypothetical protein, at 885,146 to 887,836
_04550
OLJFJH_04555: OLJFJH_04555 - 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ, at 888,215 to 889,057
_04555
OLJFJH_04560: OLJFJH_04560 - ribonuclease Z, at 889,141 to 890,055
_04560
Position (kb) 888
889
890 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 887.269 kb on - strand, within OLJFJH_04550 at 887.306 kb on + strand, within OLJFJH_04550 at 887.728 kb on + strand at 887.795 kb on + strand at 887.934 kb on - strand at 887.934 kb on - strand at 887.935 kb on + strand at 887.936 kb on - strand at 888.025 kb on + strand at 888.039 kb on + strand at 888.073 kb on + strand at 888.074 kb on - strand at 888.074 kb on - strand at 888.075 kb on + strand at 888.075 kb on + strand at 888.076 kb on - strand at 888.154 kb on + strand at 888.155 kb on - strand at 888.155 kb on - strand at 888.155 kb on - strand at 888.155 kb on - strand at 888.320 kb on + strand, within OLJFJH_04555 at 888.320 kb on + strand, within OLJFJH_04555 at 888.415 kb on + strand, within OLJFJH_04555 at 888.434 kb on - strand, within OLJFJH_04555 at 888.434 kb on - strand, within OLJFJH_04555 at 888.434 kb on - strand, within OLJFJH_04555 at 888.455 kb on + strand, within OLJFJH_04555 at 888.555 kb on + strand, within OLJFJH_04555 at 888.555 kb on + strand, within OLJFJH_04555 at 888.556 kb on - strand, within OLJFJH_04555 at 888.693 kb on + strand, within OLJFJH_04555 at 888.713 kb on + strand, within OLJFJH_04555 at 888.714 kb on - strand, within OLJFJH_04555 at 888.714 kb on - strand, within OLJFJH_04555 at 888.832 kb on + strand, within OLJFJH_04555 at 888.833 kb on - strand, within OLJFJH_04555 at 888.833 kb on - strand, within OLJFJH_04555 at 888.944 kb on - strand, within OLJFJH_04555 at 888.997 kb on + strand at 889.220 kb on + strand at 889.221 kb on - strand at 889.221 kb on - strand at 889.532 kb on + strand, within OLJFJH_04560 at 889.538 kb on + strand, within OLJFJH_04560 at 889.539 kb on - strand, within OLJFJH_04560 at 889.539 kb on - strand, within OLJFJH_04560 at 889.681 kb on + strand, within OLJFJH_04560 at 889.682 kb on - strand, within OLJFJH_04560 at 889.768 kb on + strand, within OLJFJH_04560 at 889.784 kb on + strand, within OLJFJH_04560 at 889.851 kb on + strand, within OLJFJH_04560 at 889.852 kb on - strand, within OLJFJH_04560
Per-strain Table
Position Strand Gene LocusTag Fraction FE-G2T (Control flower group 2, top) remove 887,269 - OLJFJH_04550 0.79 -1.0 887,306 + OLJFJH_04550 0.80 +0.3 887,728 + -0.4 887,795 + -0.9 887,934 - -1.5 887,934 - -0.2 887,935 + -0.9 887,936 - -0.3 888,025 + +0.2 888,039 + +0.5 888,073 + +0.3 888,074 - -0.2 888,074 - -0.3 888,075 + -0.3 888,075 + -2.8 888,076 - -0.6 888,154 + +1.2 888,155 - -0.4 888,155 - +0.5 888,155 - -0.1 888,155 - -0.8 888,320 + OLJFJH_04555 0.12 -0.0 888,320 + OLJFJH_04555 0.12 +0.5 888,415 + OLJFJH_04555 0.24 +0.0 888,434 - OLJFJH_04555 0.26 -0.3 888,434 - OLJFJH_04555 0.26 -0.5 888,434 - OLJFJH_04555 0.26 +2.3 888,455 + OLJFJH_04555 0.28 -0.2 888,555 + OLJFJH_04555 0.40 +2.3 888,555 + OLJFJH_04555 0.40 +0.6 888,556 - OLJFJH_04555 0.40 +0.8 888,693 + OLJFJH_04555 0.57 +0.1 888,713 + OLJFJH_04555 0.59 +0.5 888,714 - OLJFJH_04555 0.59 -1.0 888,714 - OLJFJH_04555 0.59 +0.8 888,832 + OLJFJH_04555 0.73 -0.5 888,833 - OLJFJH_04555 0.73 +0.4 888,833 - OLJFJH_04555 0.73 +0.7 888,944 - OLJFJH_04555 0.86 -0.6 888,997 + +0.2 889,220 + +0.4 889,221 - -0.1 889,221 - +1.3 889,532 + OLJFJH_04560 0.43 -0.2 889,538 + OLJFJH_04560 0.43 +0.5 889,539 - OLJFJH_04560 0.43 -0.0 889,539 - OLJFJH_04560 0.43 -0.3 889,681 + OLJFJH_04560 0.59 -0.6 889,682 - OLJFJH_04560 0.59 -0.4 889,768 + OLJFJH_04560 0.69 -0.1 889,784 + OLJFJH_04560 0.70 -0.2 889,851 + OLJFJH_04560 0.78 +0.6 889,852 - OLJFJH_04560 0.78 +0.1
Or see this region's nucleotide sequence