Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15830

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
3,460,212	-	ampE	OKGIIK_15825	0.14	+0.8
3,460,286	+	ampE	OKGIIK_15825	0.23	-0.3
3,460,287	-	ampE	OKGIIK_15825	0.23	-0.2
3,460,415	+	ampE	OKGIIK_15825	0.37	-1.1
3,460,416	-	ampE	OKGIIK_15825	0.37	-0.5
3,460,416	-	ampE	OKGIIK_15825	0.37	+0.4
3,460,416	-	ampE	OKGIIK_15825	0.37	+0.2
3,460,416	-	ampE	OKGIIK_15825	0.37	+0.4
3,460,416	-	ampE	OKGIIK_15825	0.37	-1.2
3,460,416	-	ampE	OKGIIK_15825	0.37	-1.6
3,460,487	+	ampE	OKGIIK_15825	0.46	-0.9
3,460,488	-	ampE	OKGIIK_15825	0.46	-0.9
3,460,488	-	ampE	OKGIIK_15825	0.46	+1.0
3,460,559	+	ampE	OKGIIK_15825	0.54	-1.5
3,460,559	+	ampE	OKGIIK_15825	0.54	-1.1
3,460,559	+	ampE	OKGIIK_15825	0.54	+0.5
3,460,559	+	ampE	OKGIIK_15825	0.54	-0.6
3,460,559	+	ampE	OKGIIK_15825	0.54	+0.4
3,460,559	+	ampE	OKGIIK_15825	0.54	+1.6
3,460,560	-	ampE	OKGIIK_15825	0.54	+0.0
3,460,709	+	ampE	OKGIIK_15825	0.71	-0.6
3,460,709	+	ampE	OKGIIK_15825	0.71	+0.1
3,460,709	+	ampE	OKGIIK_15825	0.71	+0.3
3,460,709	+	ampE	OKGIIK_15825	0.71	-0.6
3,460,709	+	ampE	OKGIIK_15825	0.71	-1.6
3,460,709	+	ampE	OKGIIK_15825	0.71	-0.1
3,460,709	+	ampE	OKGIIK_15825	0.71	+0.5
3,460,709	+	ampE	OKGIIK_15825	0.71	-0.5
3,460,709	+	ampE	OKGIIK_15825	0.71	-0.2
3,460,709	+	ampE	OKGIIK_15825	0.71	+1.1
3,460,709	+	ampE	OKGIIK_15825	0.71	+0.0
3,460,709	+	ampE	OKGIIK_15825	0.71	-0.6
3,460,710	-	ampE	OKGIIK_15825	0.71	-2.1
3,460,710	-	ampE	OKGIIK_15825	0.71	-1.3
3,460,710	-	ampE	OKGIIK_15825	0.71	+0.9
3,460,710	-	ampE	OKGIIK_15825	0.71	-1.0
3,460,710	-	ampE	OKGIIK_15825	0.71	+0.6
3,460,710	-	ampE	OKGIIK_15825	0.71	+0.2
3,460,710	-	ampE	OKGIIK_15825	0.71	+0.4
3,460,710	-	ampE	OKGIIK_15825	0.71	+0.0
3,460,710	-	ampE	OKGIIK_15825	0.71	+0.6
3,460,942	+				-1.6
3,460,942	+				-0.6
3,460,942	+				+0.4
3,460,942	+				-0.5
3,460,942	+				+0.1
3,460,942	+				+1.4
3,460,942	+				+1.9
3,460,942	+				-1.0
3,460,942	+				-0.6
3,460,942	+				-1.5
3,460,942	+				-0.4
3,460,942	+				-0.5
3,460,942	+				-1.0
3,460,942	+				-0.6
3,460,942	+				+0.8
3,460,943	-				-0.2
3,460,943	-				-0.3
3,460,943	-				-0.4
3,460,943	-				+0.3
3,460,943	-				-0.1
3,460,943	-				+0.3
3,460,943	-				-1.2
3,460,943	-				+0.7
3,460,953	+				+1.4
3,460,954	-				+0.1
3,460,954	-				-0.2
3,460,994	+				+0.2
3,460,994	+				-2.2
3,460,994	+				+0.3
3,460,994	+				+0.2
3,460,994	+				+0.2
3,460,994	+				+1.2
3,460,994	+				-2.5
3,460,994	+				+1.4
3,460,994	+				-0.6
3,460,994	+				-0.2
3,460,994	+				-3.2
3,460,995	-				-0.0
3,460,995	-				-1.2
3,460,995	-				-0.6
3,460,995	-				+1.0
3,460,995	-				+1.5
3,460,995	-				-0.2
3,460,995	-				-0.3
3,460,995	-				+0.4
3,460,995	-				-0.4
3,460,995	-				+1.4
3,461,184	+				-0.1
3,461,184	+				+0.4
3,461,185	-				-0.2
3,461,185	-				+0.4
3,461,195	+				-0.6
3,461,195	+				-0.8
3,461,195	+				-0.2
3,461,195	+				-0.9
3,461,195	+				-0.5
3,461,195	+				+0.7
3,461,196	-				+1.4
3,461,196	-				-0.4
3,461,196	-				-0.2
3,461,196	-				-0.3
3,461,196	-				-1.5
3,461,196	-				+0.1
3,461,196	-				-1.2
3,461,196	-				+0.0
3,461,196	-				-0.2
3,461,196	-				+0.8
3,461,196	-				+0.4
3,461,196	-				-0.5
3,461,370	+	nudC	OKGIIK_15830	0.27	+0.4
3,461,370	+	nudC	OKGIIK_15830	0.27	-1.8
3,461,472	+	nudC	OKGIIK_15830	0.38	-1.1
3,461,473	-	nudC	OKGIIK_15830	0.38	+0.6
3,461,688	+	nudC	OKGIIK_15830	0.60	-0.2
3,461,689	-	nudC	OKGIIK_15830	0.60	-1.3
3,461,689	-	nudC	OKGIIK_15830	0.60	+0.9
3,461,826	+	nudC	OKGIIK_15830	0.74	-0.4
3,461,827	-	nudC	OKGIIK_15830	0.74	-0.7
3,461,827	-	nudC	OKGIIK_15830	0.74	-0.7
3,461,827	-	nudC	OKGIIK_15830	0.74	+1.1
3,461,827	-	nudC	OKGIIK_15830	0.74	+0.9
3,461,827	-	nudC	OKGIIK_15830	0.74	-0.5
3,461,952	+	nudC	OKGIIK_15830	0.87	+0.2
3,461,952	+	nudC	OKGIIK_15830	0.87	+1.4
3,461,953	-	nudC	OKGIIK_15830	0.87	-0.5
3,461,953	-	nudC	OKGIIK_15830	0.87	+0.4
3,461,953	-	nudC	OKGIIK_15830	0.87	-0.4
3,462,499	+				-2.2
3,462,499	+				+1.1
3,462,499	+				-1.5
3,462,499	+				+0.3
3,462,499	+				+0.5
3,462,500	-				+0.2
3,462,500	-				+2.0
3,462,500	-				-0.3
3,462,500	-				-0.4
3,462,627	+		OKGIIK_15840	0.28	-0.1
3,462,898	+				-0.1
3,462,898	+				+1.2
3,462,899	-				-0.2
3,462,919	+				+0.4
3,462,919	+				-0.5
3,462,919	+				-0.0
3,462,919	+				-0.2
3,462,919	+				-0.0
3,462,919	+				-2.2
3,462,919	+				-0.5
3,462,919	+				-1.6
3,462,920	-				-1.8
3,462,920	-				-1.6
3,462,920	-				-0.6
3,462,920	-				-0.2
3,462,925	+				-1.5
3,462,925	+				+0.9
3,462,925	+				-0.4
3,462,949	-				+0.1
3,462,953	+				+0.8
3,462,953	+				-0.2
3,462,953	+				+0.4
3,462,953	+				+0.1
3,462,953	+				-0.8
3,462,954	-				+0.1
3,462,954	-				-0.2
3,462,954	-				-1.2
3,462,954	-				+0.6
3,462,954	-				+0.0
3,462,954	-				-0.1
3,462,954	-				-0.6
3,462,954	-				+1.1
3,462,954	-				+0.5
3,462,955	+				+0.7
3,462,956	+				-0.5
3,462,956	+				+2.2
3,462,956	+				-0.3
3,462,956	+				-1.5
3,462,956	+				-0.2
3,462,956	+				-3.1
3,462,956	+				-2.0
3,462,956	+				-0.5
3,462,956	+				-1.8
3,462,956	+				-0.7
3,462,956	+				+2.1
3,462,956	+				+0.2
3,462,956	+				-1.1
3,462,956	+				-0.8
3,462,957	-				-0.8
3,462,957	-				-1.5
3,462,957	-				+0.4
3,462,957	-				-0.6
3,462,957	-				-2.0
3,462,957	-				-0.1
3,462,957	-				+0.9
3,462,957	-				+0.0
3,462,957	-				-0.9
3,462,957	-				+0.2
3,462,957	-				-0.8
3,462,957	-				-2.0
3,462,957	-				-1.1