Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15145

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
3,291,960	-		OKGIIK_15135	0.77	-0.5
3,292,004	+		OKGIIK_15135	0.80	-0.5
3,292,004	+		OKGIIK_15135	0.80	-2.0
3,292,004	+		OKGIIK_15135	0.80	+0.5
3,292,005	-		OKGIIK_15135	0.80	-0.7
3,292,005	-		OKGIIK_15135	0.80	-2.0
3,292,005	-		OKGIIK_15135	0.80	-0.1
3,292,094	+		OKGIIK_15135	0.84	+0.9
3,292,094	+		OKGIIK_15135	0.84	+0.9
3,292,094	+		OKGIIK_15135	0.84	+0.7
3,292,094	+		OKGIIK_15135	0.84	-0.1
3,292,094	+		OKGIIK_15135	0.84	-0.8
3,292,094	+		OKGIIK_15135	0.84	-0.1
3,292,094	+		OKGIIK_15135	0.84	+1.5
3,292,094	+		OKGIIK_15135	0.84	-0.3
3,292,095	-		OKGIIK_15135	0.84	-0.6
3,292,095	-		OKGIIK_15135	0.84	-1.0
3,292,095	-		OKGIIK_15135	0.84	+1.3
3,292,095	-		OKGIIK_15135	0.84	+0.0
3,292,095	-		OKGIIK_15135	0.84	-1.5
3,292,095	-		OKGIIK_15135	0.84	+0.4
3,292,095	-		OKGIIK_15135	0.84	+0.7
3,292,095	-		OKGIIK_15135	0.84	+0.6
3,292,095	-		OKGIIK_15135	0.84	+0.2
3,292,095	-		OKGIIK_15135	0.84	+0.3
3,292,097	+		OKGIIK_15135	0.84	-0.5
3,292,152	-		OKGIIK_15135	0.87	-1.2
3,292,152	-		OKGIIK_15135	0.87	-0.5
3,292,169	+		OKGIIK_15135	0.88	+0.0
3,292,170	-		OKGIIK_15135	0.88	-0.1
3,292,170	-		OKGIIK_15135	0.88	+1.3
3,292,170	-		OKGIIK_15135	0.88	-1.6
3,292,323	-				+1.1
3,292,403	+				+0.7
3,292,403	+				-0.5
3,292,404	-				+1.3
3,292,417	+				-0.7
3,292,417	+				+1.1
3,292,417	+				+0.4
3,292,417	+				-1.2
3,292,418	-				+0.0
3,292,418	-				+0.6
3,292,418	-				-0.8
3,292,421	+				-1.2
3,292,421	+				-0.0
3,292,422	-				+0.5
3,292,569	+				+0.8
3,292,569	+				+1.0
3,292,569	+				+0.4
3,292,569	+				-2.6
3,292,569	+				-0.7
3,292,569	+				+0.8
3,292,569	+				-0.7
3,292,569	+				-2.2
3,292,569	+				-0.0
3,292,569	+				-0.7
3,292,569	+				+0.7
3,292,570	-				+1.9
3,292,570	-				+0.4
3,292,570	-				-0.5
3,292,570	-				+0.5
3,292,570	-				-1.1
3,292,591	+	yhcF	OKGIIK_15140	0.11	+0.9
3,292,591	+	yhcF	OKGIIK_15140	0.11	-0.7
3,292,591	+	yhcF	OKGIIK_15140	0.11	-2.2
3,292,591	+	yhcF	OKGIIK_15140	0.11	-0.4
3,292,591	+	yhcF	OKGIIK_15140	0.11	+1.2
3,292,592	-	yhcF	OKGIIK_15140	0.12	-0.2
3,292,592	-	yhcF	OKGIIK_15140	0.12	+1.2
3,292,592	-	yhcF	OKGIIK_15140	0.12	-0.1
3,292,592	-	yhcF	OKGIIK_15140	0.12	-1.5
3,292,592	-	yhcF	OKGIIK_15140	0.12	+1.0
3,292,595	+	yhcF	OKGIIK_15140	0.12	-0.5
3,292,596	-	yhcF	OKGIIK_15140	0.13	+0.4
3,292,644	+	yhcF	OKGIIK_15140	0.25	+0.3
3,292,644	+	yhcF	OKGIIK_15140	0.25	-0.5
3,292,644	+	yhcF	OKGIIK_15140	0.25	+0.3
3,292,645	-	yhcF	OKGIIK_15140	0.26	+0.2
3,292,645	-	yhcF	OKGIIK_15140	0.26	-0.5
3,292,671	+	yhcF	OKGIIK_15140	0.32	-0.5
3,292,725	-	yhcF	OKGIIK_15140	0.46	-0.9
3,292,725	-	yhcF	OKGIIK_15140	0.46	-1.8
3,293,001	+				+0.4
3,293,002	-				+0.0
3,293,002	-				+0.4
3,293,202	+	ccmA	OKGIIK_15145	0.30	+0.3
3,293,202	+	ccmA	OKGIIK_15145	0.30	+0.0
3,293,202	+	ccmA	OKGIIK_15145	0.30	-1.4
3,293,202	+	ccmA	OKGIIK_15145	0.30	-1.0
3,293,203	-	ccmA	OKGIIK_15145	0.30	+1.2
3,293,203	-	ccmA	OKGIIK_15145	0.30	+1.0
3,293,203	-	ccmA	OKGIIK_15145	0.30	-0.2
3,293,203	-	ccmA	OKGIIK_15145	0.30	-2.1
3,293,275	-	ccmA	OKGIIK_15145	0.38	+0.7
3,293,625	+	ccmA	OKGIIK_15145	0.78	-0.4
3,293,625	+	ccmA	OKGIIK_15145	0.78	+0.1
3,293,625	+	ccmA	OKGIIK_15145	0.78	-0.9
3,293,626	-	ccmA	OKGIIK_15145	0.78	+1.6
3,293,709	+	ccmA	OKGIIK_15145	0.87	-2.0
3,293,711	+	ccmA	OKGIIK_15145	0.87	+0.0
3,293,711	+	ccmA	OKGIIK_15145	0.87	+0.3
3,293,711	+	ccmA	OKGIIK_15145	0.87	-0.8
3,293,711	+	ccmA	OKGIIK_15145	0.87	-1.0
3,293,711	+	ccmA	OKGIIK_15145	0.87	+0.4
3,293,711	+	ccmA	OKGIIK_15145	0.87	+0.4
3,293,712	-	ccmA	OKGIIK_15145	0.87	-0.5
3,293,712	-	ccmA	OKGIIK_15145	0.87	+0.1
3,293,712	-	ccmA	OKGIIK_15145	0.87	-0.7
3,293,712	-	ccmA	OKGIIK_15145	0.87	-2.0
3,293,847	+				-0.7
3,293,847	+				-0.1
3,293,848	-				+0.3
3,293,848	-				-0.5
3,293,848	-				+0.3
3,293,848	-				+1.3
3,293,848	-				+0.7
3,293,855	+				+1.1
3,293,889	+				-0.7
3,293,889	+				-0.1
3,293,889	+				+1.0
3,293,889	+				-1.6
3,293,889	+				-1.2
3,293,889	+				+0.8
3,293,889	+				-0.8
3,293,889	+				+1.2
3,293,889	+				-1.4
3,293,890	-				-0.7
3,293,890	-				+0.0
3,293,890	-				-0.2
3,293,890	-				+0.0
3,293,890	-				-0.8
3,293,890	-				-0.8
3,293,890	-				-1.1
3,293,890	-				-0.4
3,293,890	-				+1.3
3,293,890	-				+0.5
3,293,890	-				-0.3
3,293,978	+		OKGIIK_15150	0.16	+0.6
3,293,978	+		OKGIIK_15150	0.16	-1.4
3,293,978	+		OKGIIK_15150	0.16	+2.5
3,293,978	+		OKGIIK_15150	0.16	-2.0
3,293,979	-		OKGIIK_15150	0.16	-1.5
3,293,979	-		OKGIIK_15150	0.16	+0.8
3,293,979	-		OKGIIK_15150	0.16	-0.1
3,293,979	-		OKGIIK_15150	0.16	-0.5
3,293,979	-		OKGIIK_15150	0.16	-0.3
3,293,979	-		OKGIIK_15150	0.16	-0.7
3,293,979	-		OKGIIK_15150	0.16	+0.2
3,293,979	-		OKGIIK_15150	0.16	+0.3
3,293,979	-		OKGIIK_15150	0.16	-0.4
3,294,101	+		OKGIIK_15150	0.29	+1.0
3,294,102	-		OKGIIK_15150	0.29	-1.1
3,294,227	+		OKGIIK_15150	0.42	+0.9
3,294,228	-		OKGIIK_15150	0.42	+0.1
3,294,228	-		OKGIIK_15150	0.42	+0.9
3,294,587	+		OKGIIK_15150	0.78	-0.4
3,294,588	-		OKGIIK_15150	0.79	+0.9
3,294,588	-		OKGIIK_15150	0.79	-1.0
3,294,657	+		OKGIIK_15150	0.86	+2.1
3,294,657	+		OKGIIK_15150	0.86	-1.5
3,294,657	+		OKGIIK_15150	0.86	-0.7
3,294,658	-		OKGIIK_15150	0.86	-0.0
3,294,658	-		OKGIIK_15150	0.86	+0.0
3,294,658	-		OKGIIK_15150	0.86	-3.1
3,294,658	-		OKGIIK_15150	0.86	-0.7
3,294,658	-		OKGIIK_15150	0.86	+0.2
3,294,658	-		OKGIIK_15150	0.86	-1.5
3,294,680	+		OKGIIK_15150	0.88	+0.3
3,294,680	+		OKGIIK_15150	0.88	-1.1
3,294,681	-		OKGIIK_15150	0.88	-0.4
3,294,681	-		OKGIIK_15150	0.88	+0.2
3,294,706	+				+1.3
3,294,706	+				+0.5
3,294,706	+				-0.3
3,294,706	+				-0.7
3,294,706	+				-1.5
3,294,706	+				+0.5
3,294,706	+				-1.0
3,294,706	+				-0.1
3,294,706	+				+0.7
3,294,707	-				+1.7
3,294,707	-				+0.0
3,294,714	+				+1.7
3,294,714	+				+1.1
3,294,714	+				-0.8
3,294,714	+				+0.2
3,294,714	+				+0.6
3,294,714	+				-1.5
3,294,714	+				-1.0
3,294,714	+				-1.6
3,294,714	+				-0.1
3,294,715	-				-0.4
3,294,715	-				+0.2
3,294,715	-				-1.5
3,294,715	-				-0.7
3,294,715	-				+0.0
3,294,715	-				-0.5
3,294,715	-				-0.7
3,294,715	-				-0.7
3,294,715	-				+0.7
3,294,715	-				+0.0
3,294,715	-				-0.5
3,294,724	+				-1.8