Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11880

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
2,557,624	+	rimK	OKGIIK_11870	0.45	-1.2
2,557,879	+	rimK	OKGIIK_11870	0.72	+2.5
2,557,879	+	rimK	OKGIIK_11870	0.72	-0.1
2,557,879	+	rimK	OKGIIK_11870	0.72	+1.1
2,557,879	+	rimK	OKGIIK_11870	0.72	-1.1
2,557,879	+	rimK	OKGIIK_11870	0.72	+0.7
2,557,880	-	rimK	OKGIIK_11870	0.72	-0.5
2,557,880	-	rimK	OKGIIK_11870	0.72	-0.5
2,557,880	-	rimK	OKGIIK_11870	0.72	-1.5
2,557,921	+	rimK	OKGIIK_11870	0.77	+0.3
2,557,921	+	rimK	OKGIIK_11870	0.77	-1.5
2,557,921	+	rimK	OKGIIK_11870	0.77	+1.2
2,557,921	+	rimK	OKGIIK_11870	0.77	-1.8
2,557,921	+	rimK	OKGIIK_11870	0.77	+0.5
2,557,921	+	rimK	OKGIIK_11870	0.77	-0.5
2,557,922	-	rimK	OKGIIK_11870	0.77	-0.3
2,557,922	-	rimK	OKGIIK_11870	0.77	-0.6
2,557,922	-	rimK	OKGIIK_11870	0.77	-1.8
2,557,922	-	rimK	OKGIIK_11870	0.77	-2.6
2,557,922	-	rimK	OKGIIK_11870	0.77	+0.8
2,557,987	+	rimK	OKGIIK_11870	0.84	+1.3
2,557,988	-	rimK	OKGIIK_11870	0.84	+0.2
2,557,988	-	rimK	OKGIIK_11870	0.84	-2.2
2,557,988	-	rimK	OKGIIK_11870	0.84	-0.8
2,558,023	+	rimK	OKGIIK_11870	0.88	-1.5
2,558,023	+	rimK	OKGIIK_11870	0.88	+0.8
2,558,023	+	rimK	OKGIIK_11870	0.88	+0.5
2,558,023	+	rimK	OKGIIK_11870	0.88	+1.0
2,558,023	+	rimK	OKGIIK_11870	0.88	-0.1
2,558,024	-	rimK	OKGIIK_11870	0.88	+0.3
2,558,024	-	rimK	OKGIIK_11870	0.88	-1.1
2,558,024	-	rimK	OKGIIK_11870	0.88	+0.6
2,558,024	-	rimK	OKGIIK_11870	0.88	-0.8
2,558,098	+				-1.5
2,558,098	+				-0.4
2,558,098	+				+0.1
2,558,098	+				+0.0
2,558,098	+				-0.1
2,558,099	-				+0.5
2,558,099	-				-0.3
2,558,099	-				-0.1
2,558,099	-				-2.2
2,558,099	-				-0.3
2,558,178	+		OKGIIK_11875	0.10	-0.2
2,558,178	+		OKGIIK_11875	0.10	-0.5
2,558,178	+		OKGIIK_11875	0.10	-1.1
2,558,178	+		OKGIIK_11875	0.10	+0.5
2,558,179	-		OKGIIK_11875	0.10	-0.1
2,558,179	-		OKGIIK_11875	0.10	+0.4
2,558,179	-		OKGIIK_11875	0.10	+0.4
2,558,179	-		OKGIIK_11875	0.10	-1.8
2,558,179	-		OKGIIK_11875	0.10	+0.5
2,558,179	-		OKGIIK_11875	0.10	+0.1
2,558,179	-		OKGIIK_11875	0.10	-0.7
2,558,179	-		OKGIIK_11875	0.10	+0.0
2,558,179	-		OKGIIK_11875	0.10	-0.4
2,558,179	-		OKGIIK_11875	0.10	-0.2
2,558,180	-		OKGIIK_11875	0.11	+1.0
2,558,248	+		OKGIIK_11875	0.25	-1.0
2,558,248	+		OKGIIK_11875	0.25	+0.5
2,558,248	+		OKGIIK_11875	0.25	+0.6
2,558,248	+		OKGIIK_11875	0.25	+0.8
2,558,248	+		OKGIIK_11875	0.25	-0.0
2,558,248	+		OKGIIK_11875	0.25	-0.2
2,558,248	+		OKGIIK_11875	0.25	+1.2
2,558,248	+		OKGIIK_11875	0.25	-0.6
2,558,248	+		OKGIIK_11875	0.25	+0.6
2,558,248	+		OKGIIK_11875	0.25	-2.7
2,558,248	+		OKGIIK_11875	0.25	-0.4
2,558,248	+		OKGIIK_11875	0.25	-0.4
2,558,248	+		OKGIIK_11875	0.25	-0.8
2,558,248	+		OKGIIK_11875	0.25	-0.1
2,558,248	+		OKGIIK_11875	0.25	-0.2
2,558,248	+		OKGIIK_11875	0.25	-0.8
2,558,248	+		OKGIIK_11875	0.25	-0.2
2,558,248	+		OKGIIK_11875	0.25	-0.2
2,558,248	+		OKGIIK_11875	0.25	+0.5
2,558,248	+		OKGIIK_11875	0.25	+0.1
2,558,248	+		OKGIIK_11875	0.25	-0.2
2,558,249	-		OKGIIK_11875	0.26	-2.3
2,558,249	-		OKGIIK_11875	0.26	-0.5
2,558,249	-		OKGIIK_11875	0.26	-1.3
2,558,249	-		OKGIIK_11875	0.26	+0.8
2,558,249	-		OKGIIK_11875	0.26	-0.4
2,558,249	-		OKGIIK_11875	0.26	+0.1
2,558,249	-		OKGIIK_11875	0.26	-0.6
2,558,249	-		OKGIIK_11875	0.26	-1.1
2,558,249	-		OKGIIK_11875	0.26	-0.1
2,558,249	-		OKGIIK_11875	0.26	+0.0
2,558,249	-		OKGIIK_11875	0.26	-0.5
2,558,249	-		OKGIIK_11875	0.26	-0.1
2,558,249	-		OKGIIK_11875	0.26	-0.2
2,558,249	-		OKGIIK_11875	0.26	-2.1
2,558,249	-		OKGIIK_11875	0.26	+0.1
2,558,249	-		OKGIIK_11875	0.26	-1.2
2,558,249	-		OKGIIK_11875	0.26	-0.5
2,558,249	-		OKGIIK_11875	0.26	+1.2
2,558,249	-		OKGIIK_11875	0.26	+0.8
2,558,249	-		OKGIIK_11875	0.26	+0.0
2,558,249	-		OKGIIK_11875	0.26	+0.8
2,558,249	-		OKGIIK_11875	0.26	-0.8
2,558,249	-		OKGIIK_11875	0.26	+0.1
2,558,249	-		OKGIIK_11875	0.26	-1.5
2,558,249	-		OKGIIK_11875	0.26	+0.1
2,558,249	-		OKGIIK_11875	0.26	-0.1
2,558,249	-		OKGIIK_11875	0.26	+1.0
2,558,249	-		OKGIIK_11875	0.26	+1.8
2,558,249	-		OKGIIK_11875	0.26	+0.3
2,558,249	-		OKGIIK_11875	0.26	-0.7
2,558,249	-		OKGIIK_11875	0.26	+1.8
2,558,249	-		OKGIIK_11875	0.26	-2.2
2,558,654	+	Gly_trna	OKGIIK_11880	0.45	+0.5
2,558,654	+	Gly_trna	OKGIIK_11880	0.45	+1.2
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	+0.4
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	+0.5
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	-1.7
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	+1.0
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	-0.2
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	-0.5
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	+1.9
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	+0.7
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	-1.2
2,558,655	-	Gly_trna	OKGIIK_11880	0.46	-1.3
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	-0.0
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	-0.5
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	-1.7
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	-0.5
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	-0.5
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	+0.4
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	-0.6
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	+0.5
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	+0.5
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	-0.5
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	-0.8
2,558,667	+	Gly_trna	OKGIIK_11880	0.62	-0.5
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	+0.5
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	+1.2
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	+0.4
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	+1.1
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	+0.3
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	-0.1
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	+1.9
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	-1.7
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	+0.6
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	-0.5
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	-0.9
2,558,668	-	Gly_trna	OKGIIK_11880	0.64	+1.5
2,558,675	+	Gly_trna	OKGIIK_11880	0.73	-0.6
2,558,675	+	Gly_trna	OKGIIK_11880	0.73	-0.6
2,558,675	+	Gly_trna	OKGIIK_11880	0.73	-0.0
2,558,676	-	Gly_trna	OKGIIK_11880	0.74	-0.8
2,558,676	-	Gly_trna	OKGIIK_11880	0.74	-0.8
2,558,676	-	Gly_trna	OKGIIK_11880	0.74	-0.4
2,558,676	-	Gly_trna	OKGIIK_11880	0.74	+0.5
2,558,686	+	Gly_trna	OKGIIK_11880	0.88	-2.0
2,558,686	+	Gly_trna	OKGIIK_11880	0.88	-0.2
2,558,686	+	Gly_trna	OKGIIK_11880	0.88	-0.6
2,558,686	+	Gly_trna	OKGIIK_11880	0.88	-1.8
2,558,687	-				+0.8
2,558,687	-				-0.4
2,558,687	-				-0.9
2,558,687	-				-1.1
2,558,687	-				-1.5
2,558,687	-				+0.5
2,558,824	+				-0.5
2,558,824	+				+1.2
2,558,824	+				-0.1
2,558,824	+				+0.1
2,558,824	+				-0.1
2,558,824	+				+0.9
2,558,824	+				-0.8
2,558,825	-				+1.1
2,558,825	-				-2.0
2,558,825	-				-0.1
2,559,049	+				-0.4
2,559,049	+				+0.8
2,559,049	+				-1.6
2,559,049	+				+0.4
2,559,049	+				-0.5
2,559,049	+				-0.1
2,559,049	+				-2.2
2,559,049	+				+0.2
2,559,049	+				+0.4
2,559,049	+				-1.0
2,559,049	+				+0.4
2,559,049	+				+0.6
2,559,050	-				-1.5
2,559,050	-				+0.7
2,559,050	-				+1.3
2,559,050	-				-0.1
2,559,050	-				+0.1
2,559,050	-				-1.3
2,559,050	-				+0.1
2,559,050	-				-0.4
2,559,050	-				+0.1
2,559,310	+		OKGIIK_11885	0.18	-0.4
2,559,310	+		OKGIIK_11885	0.18	+0.8
2,559,310	+		OKGIIK_11885	0.18	-0.3
2,559,310	+		OKGIIK_11885	0.18	-0.3
2,559,310	+		OKGIIK_11885	0.18	+1.1
2,559,310	+		OKGIIK_11885	0.18	-1.7
2,559,310	+		OKGIIK_11885	0.18	-1.0
2,559,311	-		OKGIIK_11885	0.18	-1.1
2,559,311	-		OKGIIK_11885	0.18	-0.6
2,559,311	-		OKGIIK_11885	0.18	-1.7
2,559,475	+		OKGIIK_11885	0.25	+0.3
2,559,476	-		OKGIIK_11885	0.25	-1.6
2,559,476	-		OKGIIK_11885	0.25	-0.8
2,559,476	-		OKGIIK_11885	0.25	+2.4
2,559,476	-		OKGIIK_11885	0.25	+1.1
2,559,476	-		OKGIIK_11885	0.25	+0.8
2,559,476	-		OKGIIK_11885	0.25	+0.8
2,559,534	+		OKGIIK_11885	0.28	-1.8
2,559,534	+		OKGIIK_11885	0.28	+1.3
2,559,534	+		OKGIIK_11885	0.28	+1.2
2,559,534	+		OKGIIK_11885	0.28	+1.2
2,559,534	+		OKGIIK_11885	0.28	-1.1
2,559,534	+		OKGIIK_11885	0.28	-0.2
2,559,534	+		OKGIIK_11885	0.28	+0.5
2,559,535	-		OKGIIK_11885	0.28	-1.5
2,559,535	-		OKGIIK_11885	0.28	+1.6
2,559,535	-		OKGIIK_11885	0.28	+1.5
2,559,535	-		OKGIIK_11885	0.28	+1.5
2,559,571	+		OKGIIK_11885	0.29	-0.0
2,559,571	+		OKGIIK_11885	0.29	-1.2
2,559,571	+		OKGIIK_11885	0.29	-0.2
2,559,571	+		OKGIIK_11885	0.29	-0.3
2,559,572	-		OKGIIK_11885	0.29	-0.3
2,559,595	+		OKGIIK_11885	0.30	-0.8
2,559,595	+		OKGIIK_11885	0.30	-0.5
2,559,595	+		OKGIIK_11885	0.30	+1.3
2,559,595	+		OKGIIK_11885	0.30	+0.5
2,559,595	+		OKGIIK_11885	0.30	-0.3
2,559,595	+		OKGIIK_11885	0.30	+0.3
2,559,595	+		OKGIIK_11885	0.30	+0.4
2,559,595	+		OKGIIK_11885	0.30	+0.5
2,559,596	-		OKGIIK_11885	0.30	-0.4
2,559,596	-		OKGIIK_11885	0.30	-0.1
2,559,596	-		OKGIIK_11885	0.30	-0.8
2,559,599	+		OKGIIK_11885	0.31	-0.3
2,559,599	+		OKGIIK_11885	0.31	+0.1
2,559,619	+		OKGIIK_11885	0.31	-0.5
2,559,638	-		OKGIIK_11885	0.32	+1.3
2,559,664	+		OKGIIK_11885	0.33	+1.1
2,559,664	+		OKGIIK_11885	0.33	-1.6
2,559,665	-		OKGIIK_11885	0.33	-0.5
2,559,665	-		OKGIIK_11885	0.33	+0.4