Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11720

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntftsI and ftsL overlap by 1 nucleotidesftsL and rsmH overlap by 4 nucleotidesrsmH and mraZ are separated by 42 nucleotides OKGIIK_11710: ftsI - cell division protein, at 2,520,937 to 2,522,751 ftsI OKGIIK_11715: ftsL - cell division protein FtsL, at 2,522,751 to 2,523,020 ftsL OKGIIK_11720: rsmH - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 2,523,017 to 2,523,958 rsmH OKGIIK_11725: mraZ - division/cell wall cluster transcriptional repressor MraZ, at 2,524,001 to 2,524,447 mraZ Position (kb) 2523 2524Strain fitness (log2 ratio) -1 0 1at 2524.003 kb on - strandat 2524.003 kb on - strandat 2524.003 kb on - strandat 2524.003 kb on - strandat 2524.003 kb on - strandat 2524.003 kb on - strandat 2524.003 kb on - strandat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.336 kb on - strand, within mraZat 2524.547 kb on - strandat 2524.547 kb on - strandat 2524.625 kb on - strandat 2524.629 kb on - strandat 2524.629 kb on - strandat 2524.629 kb on - strandat 2524.629 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
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2,524,003 - -1.7
2,524,003 - -0.1
2,524,003 - +0.8
2,524,003 - +0.5
2,524,003 - +1.1
2,524,003 - -1.1
2,524,003 - -1.3
2,524,336 - mraZ OKGIIK_11725 0.75 -0.9
2,524,336 - mraZ OKGIIK_11725 0.75 -0.1
2,524,336 - mraZ OKGIIK_11725 0.75 -0.2
2,524,336 - mraZ OKGIIK_11725 0.75 -1.7
2,524,336 - mraZ OKGIIK_11725 0.75 +0.7
2,524,336 - mraZ OKGIIK_11725 0.75 -1.5
2,524,336 - mraZ OKGIIK_11725 0.75 +0.4
2,524,336 - mraZ OKGIIK_11725 0.75 -0.5
2,524,336 - mraZ OKGIIK_11725 0.75 -0.7
2,524,336 - mraZ OKGIIK_11725 0.75 -0.8
2,524,336 - mraZ OKGIIK_11725 0.75 +0.5
2,524,336 - mraZ OKGIIK_11725 0.75 -0.8
2,524,336 - mraZ OKGIIK_11725 0.75 +1.0
2,524,547 - -1.0
2,524,547 - -0.4
2,524,625 - -0.2
2,524,629 - +0.5
2,524,629 - +0.4
2,524,629 - +1.3
2,524,629 - +0.0

Or see this region's nucleotide sequence