Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04605

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
1,004,339	+		OKGIIK_04600	0.33	-0.4
1,004,339	+		OKGIIK_04600	0.33	+0.6
1,004,340	-		OKGIIK_04600	0.33	+0.8
1,004,486	+		OKGIIK_04600	0.44	+1.4
1,004,486	+		OKGIIK_04600	0.44	+0.1
1,004,486	+		OKGIIK_04600	0.44	-0.4
1,004,486	+		OKGIIK_04600	0.44	-1.4
1,004,486	+		OKGIIK_04600	0.44	+0.7
1,004,486	+		OKGIIK_04600	0.44	+0.3
1,004,487	-		OKGIIK_04600	0.44	+1.9
1,004,487	-		OKGIIK_04600	0.44	+0.2
1,004,487	-		OKGIIK_04600	0.44	-0.7
1,004,487	-		OKGIIK_04600	0.44	-1.1
1,004,487	-		OKGIIK_04600	0.44	+1.3
1,004,487	-		OKGIIK_04600	0.44	+1.3
1,004,487	-		OKGIIK_04600	0.44	-0.7
1,004,487	-		OKGIIK_04600	0.44	-2.5
1,004,776	+		OKGIIK_04600	0.67	+0.3
1,004,776	+		OKGIIK_04600	0.67	-0.2
1,004,776	+		OKGIIK_04600	0.67	-1.6
1,004,776	+		OKGIIK_04600	0.67	-0.8
1,004,777	-		OKGIIK_04600	0.67	+0.2
1,004,777	-		OKGIIK_04600	0.67	-0.4
1,004,777	-		OKGIIK_04600	0.67	+1.1
1,004,777	-		OKGIIK_04600	0.67	-0.4
1,004,777	-		OKGIIK_04600	0.67	+0.0
1,004,777	-		OKGIIK_04600	0.67	-0.7
1,004,828	+		OKGIIK_04600	0.71	+0.6
1,004,828	+		OKGIIK_04600	0.71	-0.6
1,005,121	+				-2.0
1,005,169	+				-1.4
1,005,170	-				-0.3
1,005,170	-				-1.4
1,005,170	-				-0.1
1,005,173	+				+1.8
1,005,173	+				-0.0
1,005,173	+				-1.4
1,005,173	+				-1.6
1,005,173	+				+1.0
1,005,173	+				-0.7
1,005,173	+				-0.1
1,005,173	+				+1.2
1,005,173	+				-0.7
1,005,173	+				+0.1
1,005,173	+				+0.6
1,005,173	+				-0.9
1,005,174	-				+0.3
1,005,174	-				-0.4
1,005,174	-				-1.4
1,005,174	-				+0.7
1,005,174	-				+2.1
1,005,174	-				-1.6
1,005,174	-				+0.0
1,005,174	-				-0.4
1,005,174	-				+0.0
1,005,208	+				+0.6
1,005,208	+				-0.2
1,005,208	+				-0.2
1,005,209	-				-0.2
1,005,232	+				+0.3
1,005,232	+				-1.3
1,005,233	-				+1.2
1,005,262	-				+0.1
1,005,308	+				+0.7
1,005,309	-				+0.0
1,005,352	-		OKGIIK_04605	0.12	+0.6
1,005,640	+		OKGIIK_04605	0.33	+0.5
1,005,658	+		OKGIIK_04605	0.35	-2.0
1,005,658	+		OKGIIK_04605	0.35	+0.7
1,005,658	+		OKGIIK_04605	0.35	+0.2
1,005,659	-		OKGIIK_04605	0.35	-0.4
1,005,659	-		OKGIIK_04605	0.35	-0.4
1,005,659	-		OKGIIK_04605	0.35	+0.6
1,005,659	-		OKGIIK_04605	0.35	+1.0
1,005,659	-		OKGIIK_04605	0.35	+0.3
1,005,659	-		OKGIIK_04605	0.35	+0.4
1,005,669	+		OKGIIK_04605	0.36	+0.5
1,005,669	+		OKGIIK_04605	0.36	-2.0
1,005,669	+		OKGIIK_04605	0.36	+0.6
1,005,669	+		OKGIIK_04605	0.36	-0.3
1,005,669	+		OKGIIK_04605	0.36	+0.4
1,005,669	+		OKGIIK_04605	0.36	+1.2
1,005,670	-		OKGIIK_04605	0.36	+0.3
1,005,670	-		OKGIIK_04605	0.36	+0.3
1,005,670	-		OKGIIK_04605	0.36	+0.0
1,005,670	-		OKGIIK_04605	0.36	-0.3
1,005,670	-		OKGIIK_04605	0.36	+0.5
1,005,741	+		OKGIIK_04605	0.41	-1.7
1,005,741	+		OKGIIK_04605	0.41	-0.2
1,005,742	-		OKGIIK_04605	0.41	-1.7
1,005,742	-		OKGIIK_04605	0.41	+0.0
1,005,742	-		OKGIIK_04605	0.41	-1.0
1,005,742	-		OKGIIK_04605	0.41	+0.1
1,005,836	+		OKGIIK_04605	0.48	-1.0
1,005,837	-		OKGIIK_04605	0.48	+2.5
1,006,309	+		OKGIIK_04605	0.84	-2.0
1,006,310	-		OKGIIK_04605	0.84	-0.1
1,006,310	-		OKGIIK_04605	0.84	+1.3
1,006,310	-		OKGIIK_04605	0.84	-1.4
1,006,342	-		OKGIIK_04605	0.86	+0.3
1,006,344	-		OKGIIK_04605	0.87	-0.9
1,006,344	-		OKGIIK_04605	0.87	+0.4
1,006,344	-		OKGIIK_04605	0.87	+1.2
1,006,344	-		OKGIIK_04605	0.87	+1.3
1,006,344	-		OKGIIK_04605	0.87	+0.6
1,006,345	-		OKGIIK_04605	0.87	+0.0
1,006,448	+				+0.2
1,006,448	+				-1.0
1,006,448	+				+0.6
1,006,448	+				+0.6
1,006,449	-				+1.1
1,006,449	-				+1.0
1,006,449	-				+0.7
1,006,449	-				-0.3
1,006,449	-				-0.2
1,006,615	+				-2.6
1,006,615	+				+0.6
1,006,615	+				-0.4
1,006,615	+				-0.1
1,006,615	+				-1.2
1,006,616	-				+0.1
1,006,616	-				-1.5
1,006,616	-				+0.8
1,006,616	-				+0.0
1,006,616	-				-1.4
1,006,790	+				+0.5
1,006,790	+				+0.3
1,006,790	+				-1.5
1,006,826	+				-1.1
1,006,826	+				+0.9
1,006,826	+				+0.3
1,006,826	+				-0.8
1,006,827	-				-1.2
1,006,827	-				-1.1
1,006,827	-				+0.5
1,006,827	-				+0.6
1,006,827	-				-0.9
1,006,853	+	cusA	OKGIIK_04610	0.11	-0.7
1,006,853	+	cusA	OKGIIK_04610	0.11	+0.4
1,006,853	+	cusA	OKGIIK_04610	0.11	-2.4
1,006,853	+	cusA	OKGIIK_04610	0.11	-0.4
1,006,853	+	cusA	OKGIIK_04610	0.11	-0.3
1,006,853	+	cusA	OKGIIK_04610	0.11	-1.6
1,006,854	-	cusA	OKGIIK_04610	0.11	-1.0
1,006,854	-	cusA	OKGIIK_04610	0.11	-1.0
1,006,854	-	cusA	OKGIIK_04610	0.11	+1.7
1,006,854	-	cusA	OKGIIK_04610	0.11	+0.2
1,006,941	-	cusA	OKGIIK_04610	0.13	+1.6
1,006,941	-	cusA	OKGIIK_04610	0.13	-0.7
1,007,012	+	cusA	OKGIIK_04610	0.16	-0.5
1,007,013	-	cusA	OKGIIK_04610	0.16	-0.7
1,007,222	+	cusA	OKGIIK_04610	0.22	+0.8
1,007,368	-	cusA	OKGIIK_04610	0.27	+0.9
1,007,368	-	cusA	OKGIIK_04610	0.27	+0.7
1,007,368	-	cusA	OKGIIK_04610	0.27	+0.5
1,007,368	-	cusA	OKGIIK_04610	0.27	-1.4
1,007,489	+	cusA	OKGIIK_04610	0.31	+1.6