Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_03770

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_03765 and OKGIIK_03770 are separated by 8 nucleotidesOKGIIK_03770 and ppx are separated by 66 nucleotides OKGIIK_03765: OKGIIK_03765 - UDP-2,3-diacylglucosamine diphosphatase, at 830,449 to 831,177 _03765 OKGIIK_03770: OKGIIK_03770 - Peptidyl-prolyl cis-trans isomerase, at 831,186 to 831,887 _03770 OKGIIK_03775: ppx - exopolyphosphatase, at 831,954 to 833,471 ppx Position (kb) 831 832Strain fitness (log2 ratio) -2 -1 0 1 2at 830.247 kb on + strandat 830.268 kb on + strandat 830.268 kb on + strandat 830.268 kb on + strandat 830.268 kb on + strandat 830.268 kb on + strandat 830.268 kb on + strandat 830.268 kb on + strandat 830.268 kb on + strandat 830.269 kb on - strandat 830.269 kb on - strandat 830.269 kb on - strandat 830.269 kb on - strandat 830.297 kb on + strandat 830.297 kb on + strandat 830.297 kb on + strandat 830.297 kb on + strandat 830.298 kb on - strandat 830.415 kb on + strandat 831.623 kb on - strand, within OKGIIK_03770at 831.698 kb on - strand, within OKGIIK_03770at 831.698 kb on - strand, within OKGIIK_03770at 831.740 kb on - strand, within OKGIIK_03770at 831.740 kb on - strand, within OKGIIK_03770at 831.921 kb on + strandat 831.921 kb on + strandat 831.921 kb on + strandat 831.921 kb on + strandat 831.921 kb on + strandat 831.922 kb on - strandat 831.922 kb on - strandat 831.968 kb on + strandat 831.968 kb on + strandat 831.969 kb on - strandat 832.168 kb on + strand, within ppxat 832.168 kb on + strand, within ppxat 832.169 kb on - strand, within ppxat 832.169 kb on - strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.309 kb on + strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.310 kb on - strand, within ppxat 832.822 kb on + strand, within ppxat 832.823 kb on - strand, within ppxat 832.823 kb on - strand, within ppxat 832.849 kb on + strand, within ppxat 832.850 kb on - strand, within ppx

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
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830,247 + +1.4
830,268 + -1.9
830,268 + -1.2
830,268 + -0.4
830,268 + +0.7
830,268 + -0.7
830,268 + +1.5
830,268 + -1.5
830,268 + +1.2
830,269 - -2.0
830,269 - +0.3
830,269 - +0.6
830,269 - +0.1
830,297 + -0.6
830,297 + +0.8
830,297 + -0.7
830,297 + -0.6
830,298 - +0.2
830,415 + +1.4
831,623 - OKGIIK_03770 0.62 +0.5
831,698 - OKGIIK_03770 0.73 +0.6
831,698 - OKGIIK_03770 0.73 +1.2
831,740 - OKGIIK_03770 0.79 +0.6
831,740 - OKGIIK_03770 0.79 -0.7
831,921 + +0.0
831,921 + -1.4
831,921 + +0.4
831,921 + +0.6
831,921 + +2.5
831,922 - +1.0
831,922 - +1.2
831,968 + +0.3
831,968 + -1.6
831,969 - +0.7
832,168 + ppx OKGIIK_03775 0.14 +0.3
832,168 + ppx OKGIIK_03775 0.14 +0.1
832,169 - ppx OKGIIK_03775 0.14 +1.2
832,169 - ppx OKGIIK_03775 0.14 -0.7
832,309 + ppx OKGIIK_03775 0.23 -1.9
832,309 + ppx OKGIIK_03775 0.23 +1.6
832,309 + ppx OKGIIK_03775 0.23 -0.3
832,309 + ppx OKGIIK_03775 0.23 +0.0
832,309 + ppx OKGIIK_03775 0.23 +0.8
832,309 + ppx OKGIIK_03775 0.23 +1.8
832,309 + ppx OKGIIK_03775 0.23 -1.5
832,309 + ppx OKGIIK_03775 0.23 -0.7
832,309 + ppx OKGIIK_03775 0.23 +1.2
832,309 + ppx OKGIIK_03775 0.23 -0.7
832,309 + ppx OKGIIK_03775 0.23 +0.8
832,309 + ppx OKGIIK_03775 0.23 -0.4
832,309 + ppx OKGIIK_03775 0.23 +0.7
832,309 + ppx OKGIIK_03775 0.23 +1.6
832,309 + ppx OKGIIK_03775 0.23 -0.6
832,309 + ppx OKGIIK_03775 0.23 -0.1
832,309 + ppx OKGIIK_03775 0.23 -2.2
832,309 + ppx OKGIIK_03775 0.23 +0.1
832,309 + ppx OKGIIK_03775 0.23 +1.6
832,309 + ppx OKGIIK_03775 0.23 +0.0
832,309 + ppx OKGIIK_03775 0.23 -1.4
832,309 + ppx OKGIIK_03775 0.23 -0.9
832,310 - ppx OKGIIK_03775 0.23 -0.4
832,310 - ppx OKGIIK_03775 0.23 -0.8
832,310 - ppx OKGIIK_03775 0.23 -0.8
832,310 - ppx OKGIIK_03775 0.23 -1.2
832,310 - ppx OKGIIK_03775 0.23 +0.3
832,310 - ppx OKGIIK_03775 0.23 -0.7
832,310 - ppx OKGIIK_03775 0.23 -1.2
832,310 - ppx OKGIIK_03775 0.23 -0.4
832,310 - ppx OKGIIK_03775 0.23 +0.8
832,310 - ppx OKGIIK_03775 0.23 -0.9
832,310 - ppx OKGIIK_03775 0.23 -2.6
832,310 - ppx OKGIIK_03775 0.23 +0.4
832,310 - ppx OKGIIK_03775 0.23 +1.4
832,310 - ppx OKGIIK_03775 0.23 -0.3
832,822 + ppx OKGIIK_03775 0.57 -1.0
832,823 - ppx OKGIIK_03775 0.57 -1.0
832,823 - ppx OKGIIK_03775 0.57 +0.0
832,849 + ppx OKGIIK_03775 0.59 -1.3
832,850 - ppx OKGIIK_03775 0.59 -0.2

Or see this region's nucleotide sequence