Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_02875 and OKGIIK_02880 are separated by 160 nucleotides OKGIIK_02880 and ompR are separated by 13 nucleotides ompR and OKGIIK_02890 are separated by 17 nucleotides
OKGIIK_02875: OKGIIK_02875 - Flg-hook domain-containing protein, at 659,264 to 660,406
_02875
OKGIIK_02880: OKGIIK_02880 - STAS domain-containing protein, at 660,567 to 660,926
_02880
OKGIIK_02885: ompR - response regulator, at 660,940 to 661,302
ompR
OKGIIK_02890: OKGIIK_02890 - Histidine kinase, at 661,320 to 663,293
_02890
Position (kb) 660
661 Strain fitness (log2 ratio) -2
-1
0
1
2 at 659.602 kb on - strand, within OKGIIK_02875 at 660.096 kb on + strand, within OKGIIK_02875 at 660.236 kb on + strand, within OKGIIK_02875 at 660.236 kb on + strand, within OKGIIK_02875 at 660.236 kb on + strand, within OKGIIK_02875 at 660.237 kb on - strand, within OKGIIK_02875 at 660.525 kb on + strand at 660.525 kb on + strand at 661.109 kb on + strand, within ompR at 661.110 kb on - strand, within ompR at 661.110 kb on - strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.156 kb on + strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR at 661.157 kb on - strand, within ompR
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x remove 659,602 - OKGIIK_02875 0.30 -1.7 660,096 + OKGIIK_02875 0.73 +1.3 660,236 + OKGIIK_02875 0.85 -1.3 660,236 + OKGIIK_02875 0.85 +1.2 660,236 + OKGIIK_02875 0.85 +1.3 660,237 - OKGIIK_02875 0.85 +0.5 660,525 + -0.8 660,525 + +0.3 661,109 + ompR OKGIIK_02885 0.47 -1.1 661,110 - ompR OKGIIK_02885 0.47 -0.3 661,110 - ompR OKGIIK_02885 0.47 -1.1 661,156 + ompR OKGIIK_02885 0.60 +1.3 661,156 + ompR OKGIIK_02885 0.60 -0.5 661,156 + ompR OKGIIK_02885 0.60 +0.8 661,156 + ompR OKGIIK_02885 0.60 -0.4 661,156 + ompR OKGIIK_02885 0.60 -1.1 661,156 + ompR OKGIIK_02885 0.60 -0.8 661,156 + ompR OKGIIK_02885 0.60 -1.5 661,156 + ompR OKGIIK_02885 0.60 +0.1 661,156 + ompR OKGIIK_02885 0.60 +1.7 661,156 + ompR OKGIIK_02885 0.60 -1.1 661,156 + ompR OKGIIK_02885 0.60 -0.8 661,156 + ompR OKGIIK_02885 0.60 +1.4 661,156 + ompR OKGIIK_02885 0.60 +0.5 661,156 + ompR OKGIIK_02885 0.60 +0.5 661,156 + ompR OKGIIK_02885 0.60 +0.2 661,156 + ompR OKGIIK_02885 0.60 -1.0 661,156 + ompR OKGIIK_02885 0.60 +1.7 661,156 + ompR OKGIIK_02885 0.60 -0.1 661,156 + ompR OKGIIK_02885 0.60 +0.5 661,156 + ompR OKGIIK_02885 0.60 -1.1 661,156 + ompR OKGIIK_02885 0.60 -0.8 661,156 + ompR OKGIIK_02885 0.60 -1.3 661,157 - ompR OKGIIK_02885 0.60 +1.8 661,157 - ompR OKGIIK_02885 0.60 -0.8 661,157 - ompR OKGIIK_02885 0.60 -1.0 661,157 - ompR OKGIIK_02885 0.60 -0.1 661,157 - ompR OKGIIK_02885 0.60 +0.5 661,157 - ompR OKGIIK_02885 0.60 -0.1 661,157 - ompR OKGIIK_02885 0.60 -1.9 661,157 - ompR OKGIIK_02885 0.60 -0.3 661,157 - ompR OKGIIK_02885 0.60 -0.6 661,157 - ompR OKGIIK_02885 0.60 -0.6 661,157 - ompR OKGIIK_02885 0.60 -0.5 661,157 - ompR OKGIIK_02885 0.60 +1.1 661,157 - ompR OKGIIK_02885 0.60 -0.0 661,157 - ompR OKGIIK_02885 0.60 +0.1 661,157 - ompR OKGIIK_02885 0.60 -0.3 661,157 - ompR OKGIIK_02885 0.60 +0.8 661,157 - ompR OKGIIK_02885 0.60 +2.2 661,157 - ompR OKGIIK_02885 0.60 -0.1 661,157 - ompR OKGIIK_02885 0.60 +0.8 661,157 - ompR OKGIIK_02885 0.60 +0.2 661,157 - ompR OKGIIK_02885 0.60 -0.2
Or see this region's nucleotide sequence