Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_02015 and dxs are separated by 279 nucleotides dxs and mcrA are separated by 103 nucleotides mcrA and OKGIIK_02030 are separated by 242 nucleotides
OKGIIK_02015: OKGIIK_02015 - Release factor glutamine methyltransferase, at 464,320 to 465,147
_02015
OKGIIK_02020: dxs - 1-deoxy-D-xylulose-5-phosphate synthase, at 465,427 to 467,316
dxs
OKGIIK_02025: mcrA - HNH endonuclease, at 467,420 to 468,031
mcrA
OKGIIK_02030: OKGIIK_02030 - Multidrug transporter, at 468,274 to 469,053
_02030
Position (kb) 465
466
467
468 Strain fitness (log2 ratio) -2
-1
0
1
2 at 465.145 kb on + strand at 465.145 kb on + strand at 465.145 kb on + strand at 465.146 kb on - strand at 465.146 kb on - strand at 465.255 kb on + strand at 465.255 kb on + strand at 465.255 kb on + strand at 465.255 kb on + strand at 465.255 kb on + strand at 465.411 kb on + strand at 465.411 kb on + strand at 465.412 kb on - strand at 465.412 kb on - strand at 465.412 kb on - strand at 467.322 kb on + strand at 467.322 kb on + strand at 467.323 kb on - strand at 467.323 kb on - strand at 467.323 kb on - strand at 467.323 kb on - strand at 467.323 kb on - strand at 467.481 kb on + strand at 467.544 kb on + strand, within mcrA at 467.584 kb on + strand, within mcrA at 467.584 kb on + strand, within mcrA at 467.585 kb on - strand, within mcrA at 467.585 kb on - strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.157 kb on + strand at 468.157 kb on + strand at 468.157 kb on + strand at 468.157 kb on + strand at 468.158 kb on - strand at 468.158 kb on - strand at 468.158 kb on - strand at 468.185 kb on + strand at 468.185 kb on + strand at 468.185 kb on + strand at 468.185 kb on + strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.292 kb on + strand at 468.292 kb on + strand at 468.293 kb on - strand at 468.293 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x remove 465,145 + +0.5 465,145 + -1.3 465,145 + -0.3 465,146 - +1.3 465,146 - +0.2 465,255 + -1.8 465,255 + -0.2 465,255 + -0.5 465,255 + -0.7 465,255 + -0.5 465,411 + +0.1 465,411 + -0.0 465,412 - -1.5 465,412 - +0.5 465,412 - -0.5 467,322 + +1.5 467,322 + -0.8 467,323 - -0.1 467,323 - +1.8 467,323 - -1.3 467,323 - +0.8 467,323 - +0.9 467,481 + +0.2 467,544 + mcrA OKGIIK_02025 0.20 -0.6 467,584 + mcrA OKGIIK_02025 0.27 +0.8 467,584 + mcrA OKGIIK_02025 0.27 -0.8 467,585 - mcrA OKGIIK_02025 0.27 -0.5 467,585 - mcrA OKGIIK_02025 0.27 +0.6 467,715 + mcrA OKGIIK_02025 0.48 -0.5 467,715 + mcrA OKGIIK_02025 0.48 -0.1 467,715 + mcrA OKGIIK_02025 0.48 -1.1 467,715 + mcrA OKGIIK_02025 0.48 -1.5 467,715 + mcrA OKGIIK_02025 0.48 -0.5 467,715 + mcrA OKGIIK_02025 0.48 +0.9 467,715 + mcrA OKGIIK_02025 0.48 +0.5 467,716 - mcrA OKGIIK_02025 0.48 +1.5 467,716 - mcrA OKGIIK_02025 0.48 +0.8 467,716 - mcrA OKGIIK_02025 0.48 -0.1 467,716 - mcrA OKGIIK_02025 0.48 +0.8 467,716 - mcrA OKGIIK_02025 0.48 +0.4 467,716 - mcrA OKGIIK_02025 0.48 +0.7 467,919 + mcrA OKGIIK_02025 0.82 +0.8 467,919 + mcrA OKGIIK_02025 0.82 -0.4 467,919 + mcrA OKGIIK_02025 0.82 -1.0 467,919 + mcrA OKGIIK_02025 0.82 -1.1 467,919 + mcrA OKGIIK_02025 0.82 -0.8 467,919 + mcrA OKGIIK_02025 0.82 +0.2 467,919 + mcrA OKGIIK_02025 0.82 -0.5 467,919 + mcrA OKGIIK_02025 0.82 +0.8 467,919 + mcrA OKGIIK_02025 0.82 -1.0 467,920 - mcrA OKGIIK_02025 0.82 -0.3 467,920 - mcrA OKGIIK_02025 0.82 +0.0 467,920 - mcrA OKGIIK_02025 0.82 +0.5 467,920 - mcrA OKGIIK_02025 0.82 -0.5 467,920 - mcrA OKGIIK_02025 0.82 +1.9 467,920 - mcrA OKGIIK_02025 0.82 -0.7 467,920 - mcrA OKGIIK_02025 0.82 -1.6 467,920 - mcrA OKGIIK_02025 0.82 -1.5 467,920 - mcrA OKGIIK_02025 0.82 +0.3 467,920 - mcrA OKGIIK_02025 0.82 -0.8 467,920 - mcrA OKGIIK_02025 0.82 +1.2 467,920 - mcrA OKGIIK_02025 0.82 +0.3 468,033 + -1.1 468,033 + -0.6 468,033 + -1.8 468,033 + -0.3 468,033 + -0.9 468,033 + -2.3 468,033 + +0.4 468,033 + -2.1 468,033 + -1.1 468,034 - -1.3 468,034 - -0.1 468,034 - +1.4 468,034 - -0.2 468,034 - +0.3 468,034 - +0.4 468,034 - +0.5 468,034 - +0.3 468,034 - -0.1 468,034 - -0.1 468,034 - +1.3 468,034 - +0.9 468,034 - -0.5 468,034 - -0.3 468,034 - +2.3 468,034 - -0.6 468,034 - -0.8 468,034 - -1.1 468,034 - -0.5 468,034 - -0.5 468,034 - -0.8 468,034 - -0.1 468,034 - -0.1 468,034 - +0.6 468,034 - +0.5 468,034 - -2.3 468,034 - +0.7 468,103 + -0.7 468,103 + +1.4 468,103 + -0.3 468,103 + +1.5 468,103 + -0.5 468,103 + -0.7 468,103 + -0.3 468,103 + +0.2 468,103 + +1.2 468,103 + -0.1 468,103 + -0.0 468,103 + +0.3 468,103 + +1.1 468,103 + -0.9 468,103 + +0.2 468,103 + +1.5 468,103 + +0.4 468,103 + +0.5 468,103 + -0.2 468,104 - -0.1 468,104 - -0.3 468,104 - -1.5 468,104 - -1.8 468,104 - -0.5 468,104 - +0.9 468,104 - -0.1 468,104 - -0.8 468,104 - -0.1 468,104 - -0.0 468,104 - -1.6 468,104 - -0.9 468,104 - -1.1 468,104 - -0.5 468,104 - +0.1 468,104 - +1.2 468,104 - -0.1 468,104 - +0.1 468,157 + +0.7 468,157 + -0.6 468,157 + +0.5 468,157 + +0.7 468,158 - +0.8 468,158 - -1.3 468,158 - -1.6 468,185 + +0.9 468,185 + +1.8 468,185 + +2.2 468,185 + -0.1 468,186 - -0.1 468,186 - -1.0 468,186 - +0.1 468,186 - -0.8 468,186 - -1.4 468,186 - +0.2 468,186 - -1.9 468,186 - -1.3 468,266 + +1.1 468,266 + +0.1 468,266 + -0.8 468,266 + -2.5 468,266 + -1.1 468,266 + +0.3 468,266 + +1.8 468,266 + -0.5 468,266 + +0.8 468,266 + -0.9 468,266 + -0.8 468,266 + +0.4 468,267 - -0.6 468,267 - +1.2 468,267 - +1.0 468,267 - -2.5 468,267 - -0.2 468,267 - -0.2 468,292 + -0.8 468,292 + -0.1 468,293 - +0.2 468,293 - +0.2
Or see this region's nucleotide sequence