Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF882 and GFF883 are separated by 55 nucleotides GFF883 and GFF884 are separated by 195 nucleotides GFF884 and GFF885 are separated by 1 nucleotides GFF885 and GFF886 are separated by 750 nucleotides
GFF882 - hypothetical protein, at 221,050 to 221,352
GFF882
GFF883 - hypothetical protein, at 221,408 to 221,911
GFF883
GFF884 - hypothetical protein, at 222,107 to 222,322
GFF884
GFF885 - SOS response-associated protein YedK, at 222,324 to 222,974
GFF885
GFF886 - O-acetyltransferase WecH, at 223,725 to 224,753
GFF886
Position (kb) 222
223 Strain fitness (log2 ratio) -2
-1
0
1 at 221.332 kb on - strand at 221.354 kb on + strand at 221.364 kb on + strand at 221.364 kb on + strand at 221.364 kb on + strand at 221.365 kb on - strand at 221.365 kb on - strand at 221.365 kb on - strand at 221.387 kb on + strand at 221.387 kb on + strand at 221.387 kb on + strand at 221.387 kb on + strand at 221.387 kb on + strand at 221.387 kb on + strand at 221.388 kb on - strand at 221.388 kb on - strand at 221.388 kb on - strand at 221.388 kb on - strand at 221.388 kb on - strand at 221.389 kb on + strand at 221.389 kb on + strand at 221.389 kb on + strand at 221.390 kb on - strand at 221.390 kb on - strand at 221.390 kb on - strand at 221.390 kb on - strand at 221.391 kb on + strand at 221.392 kb on - strand at 221.392 kb on - strand at 221.392 kb on - strand at 221.392 kb on - strand at 221.392 kb on - strand at 221.403 kb on - strand at 221.417 kb on + strand at 221.417 kb on + strand at 221.417 kb on + strand at 221.418 kb on - strand at 221.418 kb on - strand at 221.431 kb on - strand at 221.431 kb on - strand at 221.431 kb on - strand at 221.888 kb on + strand at 221.888 kb on + strand at 221.888 kb on + strand at 221.888 kb on + strand at 221.888 kb on + strand at 221.888 kb on + strand at 221.888 kb on + strand at 221.888 kb on + strand at 221.888 kb on + strand at 221.889 kb on - strand at 221.889 kb on - strand at 221.889 kb on - strand at 221.889 kb on - strand at 221.889 kb on - strand at 221.889 kb on - strand at 221.889 kb on - strand at 221.976 kb on + strand at 221.976 kb on + strand at 221.976 kb on + strand at 221.977 kb on - strand at 221.977 kb on - strand at 221.977 kb on - strand at 221.977 kb on - strand at 221.980 kb on + strand at 221.980 kb on + strand at 221.980 kb on + strand at 221.980 kb on + strand at 221.980 kb on + strand at 221.981 kb on - strand at 221.981 kb on - strand at 221.981 kb on - strand at 221.981 kb on - strand at 221.981 kb on - strand at 221.981 kb on - strand at 222.033 kb on + strand at 222.055 kb on + strand at 222.055 kb on + strand at 222.074 kb on + strand at 222.074 kb on + strand at 222.075 kb on - strand at 222.102 kb on + strand at 222.102 kb on + strand at 222.103 kb on - strand at 222.103 kb on - strand at 222.266 kb on + strand, within GFF884 at 222.266 kb on + strand, within GFF884 at 222.266 kb on + strand, within GFF884 at 222.266 kb on + strand, within GFF884 at 222.266 kb on + strand, within GFF884 at 222.266 kb on + strand, within GFF884 at 222.266 kb on + strand, within GFF884 at 222.266 kb on + strand, within GFF884 at 222.267 kb on - strand, within GFF884 at 222.267 kb on - strand, within GFF884 at 222.268 kb on + strand, within GFF884 at 222.269 kb on - strand, within GFF884 at 222.269 kb on - strand, within GFF884 at 222.320 kb on + strand at 222.321 kb on - strand at 222.375 kb on + strand at 222.375 kb on + strand at 222.376 kb on - strand at 222.376 kb on - strand at 222.376 kb on - strand at 222.376 kb on - strand at 222.465 kb on - strand, within GFF885 at 222.613 kb on + strand, within GFF885 at 222.667 kb on + strand, within GFF885 at 222.667 kb on + strand, within GFF885 at 222.668 kb on - strand, within GFF885 at 222.910 kb on + strand at 222.911 kb on - strand at 222.911 kb on - strand at 222.911 kb on - strand at 222.911 kb on - strand at 222.995 kb on - strand at 223.025 kb on - strand at 223.063 kb on - strand at 223.166 kb on + strand at 223.166 kb on + strand at 223.166 kb on + strand at 223.166 kb on + strand at 223.166 kb on + strand at 223.166 kb on + strand at 223.167 kb on - strand at 223.167 kb on - strand at 223.167 kb on - strand at 223.180 kb on + strand at 223.180 kb on + strand at 223.206 kb on - strand at 223.206 kb on - strand at 223.206 kb on - strand at 223.244 kb on + strand at 223.244 kb on + strand at 223.245 kb on - strand at 223.245 kb on - strand at 223.293 kb on + strand at 223.298 kb on - strand at 223.298 kb on - strand at 223.298 kb on - strand at 223.337 kb on + strand at 223.338 kb on - strand at 223.422 kb on + strand at 223.428 kb on + strand at 223.428 kb on + strand at 223.428 kb on + strand at 223.428 kb on + strand at 223.429 kb on - strand at 223.429 kb on - strand at 223.429 kb on - strand at 223.429 kb on - strand at 223.469 kb on - strand at 223.555 kb on - strand at 223.627 kb on - strand at 223.630 kb on - strand at 223.636 kb on + strand at 223.636 kb on + strand at 223.636 kb on + strand at 223.636 kb on + strand at 223.637 kb on - strand at 223.637 kb on - strand at 223.637 kb on - strand at 223.637 kb on - strand at 223.641 kb on - strand at 223.680 kb on + strand at 223.681 kb on - strand at 223.760 kb on - strand at 223.778 kb on - strand at 223.786 kb on + strand at 223.796 kb on - strand at 223.802 kb on - strand at 223.805 kb on + strand at 223.805 kb on + strand at 223.891 kb on + strand, within GFF886 at 223.891 kb on + strand, within GFF886 at 223.892 kb on - strand, within GFF886 at 223.905 kb on - strand, within GFF886 at 223.905 kb on - strand, within GFF886 at 223.940 kb on - strand, within GFF886
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 221,332 - +0.5 221,354 + +0.3 221,364 + -0.5 221,364 + -1.1 221,364 + +0.8 221,365 - +0.6 221,365 - -0.2 221,365 - +0.3 221,387 + -0.5 221,387 + +0.7 221,387 + +0.5 221,387 + +0.0 221,387 + -0.3 221,387 + +0.0 221,388 - +1.3 221,388 - -0.4 221,388 - -0.1 221,388 - -0.2 221,388 - +0.2 221,389 + +0.9 221,389 + +0.5 221,389 + -0.1 221,390 - -1.5 221,390 - -0.5 221,390 - +1.2 221,390 - -1.0 221,391 + -0.4 221,392 - -1.4 221,392 - +1.7 221,392 - +0.1 221,392 - +0.2 221,392 - +1.4 221,403 - -0.9 221,417 + -0.6 221,417 + -0.5 221,417 + -0.4 221,418 - -1.5 221,418 - +0.7 221,431 - +0.7 221,431 - +1.5 221,431 - +0.7 221,888 + -0.5 221,888 + -0.7 221,888 + -2.0 221,888 + -0.0 221,888 + +0.9 221,888 + +0.2 221,888 + +0.7 221,888 + +0.0 221,888 + +1.1 221,889 - -0.5 221,889 - +0.8 221,889 - +0.2 221,889 - -0.2 221,889 - -0.8 221,889 - +0.3 221,889 - +0.2 221,976 + -0.0 221,976 + -0.5 221,976 + -0.1 221,977 - -0.6 221,977 - -0.1 221,977 - -0.8 221,977 - -0.6 221,980 + +1.3 221,980 + -0.2 221,980 + -0.1 221,980 + -0.3 221,980 + -0.0 221,981 - -0.5 221,981 - +0.0 221,981 - -0.5 221,981 - +0.5 221,981 - -0.2 221,981 - +0.0 222,033 + -0.2 222,055 + +0.7 222,055 + -1.5 222,074 + +0.5 222,074 + +0.8 222,075 - -0.0 222,102 + -0.4 222,102 + -1.1 222,103 - -0.3 222,103 - -0.4 222,266 + GFF884 0.74 -0.5 222,266 + GFF884 0.74 +0.1 222,266 + GFF884 0.74 -0.1 222,266 + GFF884 0.74 +1.0 222,266 + GFF884 0.74 +0.7 222,266 + GFF884 0.74 -1.2 222,266 + GFF884 0.74 -0.2 222,266 + GFF884 0.74 -0.1 222,267 - GFF884 0.74 +0.8 222,267 - GFF884 0.74 +0.5 222,268 + GFF884 0.75 -1.0 222,269 - GFF884 0.75 +0.9 222,269 - GFF884 0.75 -2.0 222,320 + +0.3 222,321 - -0.8 222,375 + -0.5 222,375 + +1.5 222,376 - +0.5 222,376 - +0.1 222,376 - +0.1 222,376 - +0.2 222,465 - GFF885 0.22 -0.3 222,613 + GFF885 0.44 -0.1 222,667 + GFF885 0.53 -0.3 222,667 + GFF885 0.53 -1.1 222,668 - GFF885 0.53 -1.5 222,910 + +0.2 222,911 - +0.5 222,911 - +1.4 222,911 - -0.5 222,911 - +0.5 222,995 - -0.5 223,025 - +0.2 223,063 - -0.1 223,166 + -0.3 223,166 + +0.5 223,166 + +0.4 223,166 + +1.1 223,166 + +0.5 223,166 + -0.8 223,167 - -1.3 223,167 - -0.1 223,167 - -0.2 223,180 + +0.3 223,180 + -0.8 223,206 - +0.2 223,206 - +0.4 223,206 - +0.9 223,244 + -0.5 223,244 + +0.9 223,245 - -0.6 223,245 - +0.2 223,293 + -0.8 223,298 - +0.3 223,298 - -0.2 223,298 - +0.8 223,337 + -0.2 223,338 - -1.8 223,422 + +0.4 223,428 + +0.0 223,428 + -1.1 223,428 + -0.2 223,428 + +1.3 223,429 - +0.4 223,429 - +0.6 223,429 - -0.3 223,429 - +0.4 223,469 - -0.2 223,555 - +0.5 223,627 - +0.6 223,630 - -0.3 223,636 + +0.1 223,636 + +0.5 223,636 + +0.2 223,636 + -0.1 223,637 - +1.0 223,637 - -0.1 223,637 - +0.5 223,637 - -1.5 223,641 - -0.3 223,680 + -0.4 223,681 - -1.1 223,760 - +0.3 223,778 - -1.5 223,786 + -1.4 223,796 - +0.5 223,802 - +0.2 223,805 + -0.7 223,805 + +0.1 223,891 + GFF886 0.16 +0.8 223,891 + GFF886 0.16 -0.3 223,892 - GFF886 0.16 -1.4 223,905 - GFF886 0.17 +0.2 223,905 - GFF886 0.17 +0.1 223,940 - GFF886 0.21 +1.0
Or see this region's nucleotide sequence